Pairwise Alignments

Query, 643 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  216 bits (549), Expect = 3e-60
 Identities = 134/391 (34%), Positives = 226/391 (57%), Gaps = 15/391 (3%)

Query: 263 LTDDMYWTL--MVFVDKATALADVDVAVANAITTGIVLIG-------ISVGVIIFIINQI 313
           L D+M  TL  +V ++K +A     +A +    + I +IG       +++G+ + +   I
Sbjct: 155 LADEMAATLRELVTLNKTSANQAASLAQSVFSQSRIWVIGMIVLTALVTIGLAVLLTRSI 214

Query: 314 YKPLLRLKVAVLDLAQG--SGDLTRRLEVNGNDDLAQISEGFNRFSGNLQNMMLQISDAT 371
             PL +     L +AQG  SGDLT  + V G D+ A++ +       NL++ + +IS+++
Sbjct: 215 VLPLAQS----LKVAQGVASGDLTGEISVCGRDEPARLQQALKSMQENLRDTIRRISESS 270

Query: 372 QIISSSIEQLSQTAKENEQMLISHSSETDQVVTAITQMSESARTVAESVTQSNQITEAAS 431
             ++S+ E+LS   ++  + L   S E +Q  TA+ QM+ +   VA +   ++Q +  + 
Sbjct: 271 NQLASASEELSCVTEDATRGLHQQSQEIEQAATAVNQMTAAVEEVASNAVATSQASRESD 330

Query: 432 KEAQQSLVIVNNAVSTVTSLVNDVENMSESISNMNRDANKISEVLSVIGAISEQTNLLAL 491
           + AQ+    V   V ++ +L  DV +    + ++ +    IS+VL VI +I+EQTNLLAL
Sbjct: 331 RIAQRGREQVQQTVVSIEALATDVTDNVTQVEDLAQKVYGISKVLDVIRSIAEQTNLLAL 390

Query: 492 NAAIEAARAGEQGRGFAVVADEVRALAARTQNSTTEISDMLTKLLEGTDSVVGAMERTKQ 551
           NAAIEAARAG+ GRGFAVVADEVRALA RTQ ST EI  M++ + +GTD  V +M+++  
Sbjct: 391 NAAIEAARAGDAGRGFAVVADEVRALAHRTQQSTQEIEQMISGIQQGTDQAVSSMQQSNT 450

Query: 552 QCQTTADKTSEVSGSLNMMSASVSDIDDLSTQIAAATEQQSTVAAELSRNMLSIREIVES 611
           + ++T D       +L  ++++ + I++ +  IA+A+EQQ+ VA E+ RN+++IR++   
Sbjct: 451 RARSTLDIAKSAGTALEEIASAFTLINERNLVIASASEQQAAVAREVDRNLMNIRDLAHQ 510

Query: 612 LVVSGRQTVGATESLSHSNHELEQLVGKFKL 642
                 QT  A+  LS    +L  LV +F +
Sbjct: 511 TSTGANQTSAASHDLSRLAVDLNTLVARFSV 541