Pairwise Alignments

Query, 643 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 540 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  209 bits (532), Expect = 3e-58
 Identities = 125/352 (35%), Positives = 207/352 (58%), Gaps = 7/352 (1%)

Query: 294 TGIVL---IGISVGVIIFIINQIYKPLLRLKVAVLDLAQGSGDLTRRLEVNGNDDLAQIS 350
           +GIVL   I I +GV+I  +  I +P+ +   +   +AQG  DLT+ +     D+  Q+ 
Sbjct: 193 SGIVLAFLIAIIIGVLITRL--ITRPIAQAVQSAQRIAQG--DLTQAIITERTDEAGQLL 248

Query: 351 EGFNRFSGNLQNMMLQISDATQIISSSIEQLSQTAKENEQMLISHSSETDQVVTAITQMS 410
              +   G L++ +++I++A+  ++S+ E+LS    E+ + L   + E  Q  TA+ QM+
Sbjct: 249 MALSDMQGGLKSTLVEIANASDQLASAAEELSAVTDESSRGLTRQNDEIQQAATAVNQMT 308

Query: 411 ESARTVAESVTQSNQITEAASKEAQQSLVIVNNAVSTVTSLVNDVENMSESISNMNRDAN 470
            +   VA +   +++ +  A+ EA+     V  AVS ++S+V ++ + ++S++++     
Sbjct: 309 AAVDEVASNAVSTSEASRQATTEAEDGRQQVEQAVSGMSSMVVEINDSTQSVADLAGQVR 368

Query: 471 KISEVLSVIGAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQNSTTEISD 530
           +I +V+ VI  I++QTNLLALNAAIEAARAGEQGRGFAVVADEVRALA RTQ ST +I  
Sbjct: 369 EIGKVIDVIRGIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAHRTQISTVDIEK 428

Query: 531 MLTKLLEGTDSVVGAMERTKQQCQTTADKTSEVSGSLNMMSASVSDIDDLSTQIAAATEQ 590
           M+  +  G D  V AM ++      T         +L  ++ASV+ I++ +  IA+A+E+
Sbjct: 429 MIGDVQTGADDAVAAMNKSLTWANNTQTLAQNAGEALQRITASVAKINERNLVIASASEE 488

Query: 591 QSTVAAELSRNMLSIREIVESLVVSGRQTVGATESLSHSNHELEQLVGKFKL 642
           Q+ VA E+ RN+L+I+++         QT  +++ LS        LV KF+L
Sbjct: 489 QAQVAREVDRNLLNIQDLSTQTAAGAHQTNASSQDLSRLATSFNVLVSKFQL 540