Pairwise Alignments

Query, 643 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  257 bits (656), Expect = 1e-72
 Identities = 182/651 (27%), Positives = 312/651 (47%), Gaps = 38/651 (5%)

Query: 8   MTLGFKGRIYASVVILVTISLMVLGTINMLSLKREMIDSLTTETQNKLNYHVSELEFWVK 67
           M L  K ++  SVV+ + ++   L      + +++   ++ +E++N L  H   +  W  
Sbjct: 11  MRLSLKRKMVFSVVVAIAVTAAALVAAGYQTFEKDSWRAIESESRNTLQAHAKGIGDWFL 70

Query: 68  SRYEAVSRGANLFTPELSDTDNLNKVRLLAEAAQITNVIAAYEDGRSYMSMDKEGGVTTN 127
            +  A+         E+     L  V  L +  Q  +   +Y          ++  + T 
Sbjct: 71  GKQLALKG----LREEIERNPQLELVPHLRQTLQSGSFGLSYYGNEQGEMFRQDPSLNTA 126

Query: 128 RFKFTDRDWYQQAKSRRSPFLTEIYQDQVTGKKVISAVSPILHQGQFVGALLGDFQLDDI 187
            +    R WY++AK+   P  TE Y        V++   P+ +QGQ +G    +  LD +
Sbjct: 127 DYDPRVRGWYKEAKAAGKPITTEPYVSVTMQTLVVTLAEPVRYQGQLIGVAASNLALDKL 186

Query: 188 ITQVSNMRFAG-GAATLTDKNAVFFASDDPNDIGRTPSQVSPSFREMEAGFHRQESGHLS 246
           I  V  +   G G A L ++     A    + I +   ++S      +     ++     
Sbjct: 187 IKDVLAIEVPGKGYAILVNQKGKIVAHPTQDLILKPTEEMSAQLTISKLNIAAKDHSLFQ 246

Query: 247 FPYLGIEFDGYYKRVNLTDDMYWTLMVFVDKATALADVDVAVANAITTGIVLIGISVGVI 306
               G +     + V  TD   W L++ +DK      ++  +       +V IGI +G++
Sbjct: 247 LSMDGRDKVLMAEEVANTD---WLLVMVMDKGVLEQPLNDML-------MVQIGIGLGIL 296

Query: 307 I--------FIINQIYKPLLRLKVAVLDLAQGSGDLTRRLEVNGNDDLAQISEGFNRFSG 358
           +        F+  Q+ + L  +  A+ D+A+G GDLTRRL+V   D++  +++ FN+F  
Sbjct: 297 LVMALLTSWFVARQLNE-LGNIANALADIAEGDGDLTRRLDVRSQDEVGLLADKFNKFVD 355

Query: 359 NLQNMMLQISDATQIISSSIEQLSQTAKENEQMLISHSSETDQVVTAITQMSES------ 412
            L  M+  + + +  ++   +  + +A +  + + +   E   V TA+T+M+ +      
Sbjct: 356 RLHQMVKNVREVSVALTQGADHAAASATQASKRIRTQQDEITMVATAVTEMASATAEIAS 415

Query: 413 -ARTVAESVTQSNQITEAASKEAQQSLVIVNNAVSTVTSLVNDVENMSESISNMNRDANK 471
            A   A++ TQS Q+ E    + QQS   ++     +T  V         IS +   AN+
Sbjct: 416 NAENTAKNATQSVQLGEDGFAQMQQSKQSIDQLAQELTGAVR-------IISELEVHANE 468

Query: 472 ISEVLSVIGAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQNSTTEISDM 531
           IS +LS I  I+EQTNLLALNAAIEAARAGEQGRGFAVVADEVR L+ RT  ST EI   
Sbjct: 469 ISTILSTIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTEEIQTK 528

Query: 532 LTKLLEGTDSVVGAMERTKQQCQTTADKTSEVSGSLNMMSASVSDIDDLSTQIAAATEQQ 591
           +  L + T + V  M  + +  +T+    ++   SL  +S ++  I D++TQIA+A E+Q
Sbjct: 529 IAGLQKVTTTAVSVMTESHKLVETSVADVNQTGASLQAISEAIQQISDMATQIASAAEEQ 588

Query: 592 STVAAELSRNMLSIREIVESLVVSGRQTVGATESLSHSNHELEQLVGKFKL 642
           S V A+++ N  S+RE+ + L    +Q+V   +SL     EL + + +FKL
Sbjct: 589 SLVTADINVNTESVREVSDQLAEEAQQSVQQAKSLHAMAQELNKEISRFKL 639