Pairwise Alignments

Query, 643 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  270 bits (690), Expect = 1e-76
 Identities = 184/642 (28%), Positives = 313/642 (48%), Gaps = 20/642 (3%)

Query: 7   VMTLGFKGRIYASVVILVTISLMVLGTINMLSLKREMIDSLTTETQNKLNYHVSELEFWV 66
           +M L  K ++  + +  V +    L   +   L+++  +++ T      +     +  W+
Sbjct: 4   IMKLTLKHKLIGASLSAVVVMATALTWFSASQLQQQTSNAVYTRADAISSTAAKGISDWI 63

Query: 67  KSRYEAVSRGANLFTPELSDTDNLNKVRLLAEAAQITNVIAAYEDGRSYMSMDKEGGVTT 126
             R +++S   N      +    L + R    A    ++     DG  Y S  +      
Sbjct: 64  SIR-KSISTAFNAHIEAQNVVPYLQQAR---NAGGFDDIFYGTTDGAMYRSHPER----- 114

Query: 127 NRFKFTDRD--WYQQAKSRRSPFLTEIYQDQVTGKKVISAVSPILHQGQFVGALLGDFQL 184
           NR  +  R   WY+ A S     +T  Y D +TG  +++   P+   G   G +  D  +
Sbjct: 115 NRADYDPRTRPWYKDAASAGKQIITTAYSDAITGALLVTIAEPVRLNGNMSGVVGADVLI 174

Query: 185 DDIITQVSNMRFAGGAATLT--DKNAVFFASDDPNDIGRTPSQVSPSF--REMEAGFHRQ 240
           D +I  V +M     A T+    +N  F A  D + + +  + +S +   R +E   ++ 
Sbjct: 175 DQLIADVISMDAGKNAQTMLIDGQNGSFLAHPDKSLLLKPVTTLSSALDMRTIERAANQG 234

Query: 241 ESGHLSFPYLGIEFDGYYKRVNLTDDMYWTLMVFVDKATALADVDVAVANAITTGIVLIG 300
           E   L+    G+E   ++  V    D  W   V +D  T  A     +   ITT +++  
Sbjct: 235 EL--LALKLNGVEKFFFFTAV---PDTPWYFAVQMDSDTEYASHSELLTGLITTALLITV 289

Query: 301 ISVGVIIFIINQIYKPLLRLKVAVLDLAQGSGDLTRRLEVNGNDDLAQISEGFNRFSGNL 360
           I V ++ ++++ +++ L R+  A+ ++A G  DLT+RLE   +D++ Q++  FN F  N+
Sbjct: 290 IVVVIVSWLVSFLFRDLGRVSKALEEIASGDADLTQRLEPRSDDEVGQLASNFNTFVSNM 349

Query: 361 QNMMLQISDATQIISSSIEQLSQTAKENEQMLISHSSETDQVVTAITQMSESARTVAESV 420
             M+L++S  +  ++   +  +  A+E    +     E + V TAI +M+ + + +A + 
Sbjct: 350 HTMVLKLSHVSAALAQQSKVTAAQAEERSSRIRLQQDEINMVATAINEMAAATQEIAGNA 409

Query: 421 TQSNQITEAASKEAQQSLVIVNNAVSTVTSLVNDVENMSESISNMNRDANKISEVLSVIG 480
             + Q    A          V     ++ SL  +V+  +E I  +    ++IS +LS I 
Sbjct: 410 DHTAQNAGEAVTACVHGAGQVTQTQRSIQSLAEEVQVATEVIQELEAHGHQISTILSTIQ 469

Query: 481 AISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQNSTTEISDMLTKLLEGTD 540
            I+EQTNLLALNAAIEAARAGEQGRGFAVVADEVR L+ RT  ST EI  M+  L   T 
Sbjct: 470 NIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTKEIQQMIETLQATTG 529

Query: 541 SVVGAMERTKQQCQTTADKTSEVSGSLNMMSASVSDIDDLSTQIAAATEQQSTVAAELSR 600
             VG M+ +++   T+ D  +E S SL  +  +V  I D++TQIA+A E+Q++V +E++R
Sbjct: 530 KAVGIMDDSRRLADTSVDDANEASVSLEQIHKTVERISDMATQIASAAEEQASVTSEITR 589

Query: 601 NMLSIREIVESLVVSGRQTVGATESLSHSNHELEQLVGKFKL 642
           N + IR++   L             LS  +HELEQ + +FKL
Sbjct: 590 NTVGIRDVSNDLAQEAHSAAEQAAELSELSHELEQEIRRFKL 631