Pairwise Alignments

Query, 643 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 714 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  228 bits (580), Expect = 9e-64
 Identities = 157/525 (29%), Positives = 270/525 (51%), Gaps = 20/525 (3%)

Query: 136 WYQQAKSRRSPFLTEIYQDQVTGKKVI--SAVSPILHQGQFVGALLGDFQLDDI--ITQV 191
           W+   ++     + E Y   + G++V+  S V P+   G+ +  L  D  L+ +  ++Q 
Sbjct: 192 WWVCPRTSGKVCVVEPYFYDIDGQQVLMTSIVFPLAVNGKIIATLSIDINLNSLQALSQE 251

Query: 192 SNMRFAGGAAT---LTDKNAVFFASDDPNDIGRTPSQVSPSFREMEAGFHRQESGHLSFP 248
           ++     G  T   LT    +   S D + + +   QV P+  +      +   G L+  
Sbjct: 252 ASRSLYEGRTTVGILTPVGLLAGYSADASKLAQRFDQVDPT--KGAELVRKLADGKLTTL 309

Query: 249 YLGIEFDGYYKRVNLTDDMYWTLMVFVDK--ATALADVDVAVANAITTGIVLIGISVGVI 306
           +             + D   W +++ V +   T  A+      +A+ T   L+ +S+G+ 
Sbjct: 310 HDRQRLKVLAAFRPIPDAQPWGVLLDVPENALTGPAETLKQELDALNTSGTLLELSLGLA 369

Query: 307 IFIINQIY---------KPLLRLKVAVLDLAQGSGDLTRRLEVNGNDDLAQISEGFNRFS 357
             I+  +          +P+L +   + D+A G GDLTRRL     D+L +++  FNRF 
Sbjct: 370 AAIVGLLLVWLMARGVTRPILGVAAMLKDIASGEGDLTRRLTYQKQDELGELAGWFNRFL 429

Query: 358 GNLQNMMLQISDATQIISSSIEQLSQTAKENEQMLISHSSETDQVVTAITQMSESARTVA 417
             LQ  + ++  + Q    + +Q S  A E    +     + DQV TA  +MS +A+ VA
Sbjct: 430 DKLQPTIAEVKRSVQAARGTADQSSAIATETSAGMEQQYRQVDQVATASHEMSATAQDVA 489

Query: 418 ESVTQSNQITEAASKEAQQSLVIVNNAVSTVTSLVNDVENMSESISNMNRDANKISEVLS 477
            S  Q+ Q    A +  ++ L +++   S++ +L  ++ +    I  + +++ KI  VL 
Sbjct: 490 RSAAQAAQAARDADQATREGLAVIDRTTSSIGALAANMSDTMAEIEGLAQNSEKIGSVLE 549

Query: 478 VIGAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQNSTTEISDMLTKLLE 537
           VI +I+EQTNLLALNAAIEAARAGE GRGFAVVADEVR LA RTQ S  E   ++  L  
Sbjct: 550 VIRSIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQESVEETRQVIEALQN 609

Query: 538 GTDSVVGAMERTKQQCQTTADKTSEVSGSLNMMSASVSDIDDLSTQIAAATEQQSTVAAE 597
           GT  VVGAM+ + +Q Q   ++  +   +L  +  +V+ I D++ QIA+A E+QS VA E
Sbjct: 610 GTREVVGAMDHSHRQAQGGVEQVGQAVTALQRIGQAVTVITDMNLQIASAAEEQSAVAEE 669

Query: 598 LSRNMLSIREIVESLVVSGRQTVGATESLSHSNHELEQLVGKFKL 642
           ++ N+ +IR++ ESL     ++   ++SL+   ++ + L+ +F++
Sbjct: 670 INSNVATIRDVTESLSGQANESARVSQSLNSLANQQQALMDQFRV 714