Pairwise Alignments

Query, 379 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 402 a.a., major facilitator transporter from Pseudomonas simiae WCS417

 Score =  119 bits (299), Expect = 1e-31
 Identities = 100/396 (25%), Positives = 186/396 (46%), Gaps = 27/396 (6%)

Query: 6   SLWLMVIMLMFPQIVETIYSPVLGSIARSFSVSDAQAAQTLSVYFLAFALGVVIWGVLAD 65
           +L L +I  + P  ++ IY P L ++  S   S A    +L+V+F+   +  + +G ++D
Sbjct: 9   ALLLGLITAVGPFAID-IYLPALPTLGASLHASPALVQMSLTVFFVIVGVCQLFYGPISD 67

Query: 66  KWGRRPTMLVGLLIYGSATFIAMQTDSFTILMLARVFSAFGIAVGSVVTQTILRDVFSGH 125
            +GR+P +  GL+I+  A+       +   L+  R   AFG   G V+ + I+RD+++GH
Sbjct: 68  VFGRKPPIYAGLVIFAVASVGCALAPTIETLIAFRALQAFGACAGMVIPRAIVRDLYTGH 127

Query: 126 ELRKVFSLMGIGISISPVLGMLLGGQLAFAGGHQLVFLALFFIALVLFVYNLCQLPETQQ 185
           E  K+ +L+ + +S+SP+L  L G  +      + VF  L  +A+   V  + QLPET  
Sbjct: 128 EAAKLMALLMLVMSVSPILAPLAGSLVIALWSWREVFAVLAVVAVACLVMTIVQLPETHP 187

Query: 186 VKPKIALGCLVARMFKDRQVLL-SALLVALYNVALFSYYQLGAFIFSDLGLDAEQFGYSG 244
            + +  LG  +   F     LL   + + L  V  F       FI S   +  E +G + 
Sbjct: 188 AERR--LGKTLGNAFSSYGALLRDPVFIGLSVVCGFGLATFFVFIGSAPFVYIEYYGLTP 245

Query: 245 IALGLGSLI--GSFLNKTLLAKQVPQR---------ALLLLAALLLIMGTIGVSLTLDSI 293
               LG  +   SF   + L  ++  R         +++ +AA++ ++     +L +DS+
Sbjct: 246 TQFSLGFALNAASFFAMSQLTARLTARFGLAPLIRWSVVAVAAVMALLA--ATTLWVDSL 303

Query: 294 GFVAAMILVVIAY-GMAIPNILSTALVEYKSQAGSAGALFGLLYYLLIGSGLALTGLV-- 350
             +  ++ +   + G+ +P     +L ++ + AGSA AL G +  +     + + G+   
Sbjct: 304 ALMMTLLFIGFGFLGLLLPAAGVLSLEDHGAVAGSASALLGAIQMITAALSMTVVGVFAD 363

Query: 351 -----QRLGVVL-LMCAGITLLATLAR-SSHIARLP 379
                  +G+ L  + A +T L TL R   H+A  P
Sbjct: 364 HTPAPMLIGIALCAIAAMLTTLWTLRRLPIHLASAP 399