Pairwise Alignments

Query, 379 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 402 a.a., Multidrug resistance transporter, Bcr/CflA family from Variovorax sp. SCN45

 Score =  103 bits (257), Expect = 8e-27
 Identities = 90/361 (24%), Positives = 162/361 (44%), Gaps = 19/361 (5%)

Query: 23  IYSPVLGSIARSFSVSDAQAAQTLSVYFLAFALGVVIWGVLADKWGRRPTMLVGLLIYGS 82
           +Y P L +I  +          +L  +F+A   G ++ G L+D +GRR  M+ GL+++  
Sbjct: 28  MYLPALPAIGHALGADPHAMQASLMAFFIAVGAGQLVAGPLSDMFGRRRPMVAGLVLFML 87

Query: 83  ATFIAMQTDSFTILMLARVFSAFGIAVGSVVTQTILRDVFSGHELRKVFSLMGIGISISP 142
           A+          +L+  R     G     V  + ++RD+++G E  ++ SL+ +  S+SP
Sbjct: 88  ASIGCALAPDVGVLIALRFLQGLGACACMVTPRAVVRDLYTGPEAARMMSLLLMVYSVSP 147

Query: 143 VLGMLLGGQLAFAGGHQLVFLALFFIALVLFVYNLCQLPETQQVKPKIALGCLVAR---- 198
           +L  L+G  +A + G + VF  +  + L      +  LPET+    +++     A     
Sbjct: 148 ILAPLVGSFVAESVGWRAVFGVVAALGLAGLAMLMAFLPETRPAAARLSSNFRSAMAGYG 207

Query: 199 -MFKDRQVLLSALLVALYNVALFSYYQLGAFIFS-DLGLDAEQFGYSGIALGLGSLIGSF 256
            + +DR+ +  A + +    A F Y     F+ S   G+   Q+        +  L  S 
Sbjct: 208 LLLRDRRFMALAFMASFTVSAFFVYVANSPFVMSAHYGVSPRQYALLFALNAVSLLALSQ 267

Query: 257 LNKTLLAKQVPQRALLLLAALLLIMGTIGVSLTLDSIG---FVAAMILVVIAY---GMAI 310
            N  L+ +   +R  +L  A+++  G+IG+ L L   G       ++L++I Y   G+ +
Sbjct: 268 ANGWLVTRFGIRR--VLRTAVMVQAGSIGLLLVLTLAGIDRLAVMVVLLMIGYGVNGLIV 325

Query: 311 PNILSTALVEYKSQAGSAGALFGLLYYLLIGSGLALTGLVQRL--GVVLLMCAGITLLAT 368
           P     A+  + S AG+A AL G + +     G  +  LV     G  L M AGI   A 
Sbjct: 326 PATFVLAMEGHASLAGTASALIGTMNF---AGGALMVALVAPFANGKPLPMVAGIAACAA 382

Query: 369 L 369
           +
Sbjct: 383 V 383