Pairwise Alignments

Query, 379 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 411 a.a., Multidrug resistance transporter, Bcr/CflA family from Variovorax sp. SCN45

 Score =  108 bits (271), Expect = 2e-28
 Identities = 98/370 (26%), Positives = 166/370 (44%), Gaps = 14/370 (3%)

Query: 9   LMVIMLMFPQIVETIYSPVLGSIARSFSVSDAQAAQTLSVYFLAFALGVVIWGVLADKWG 68
           L V+ ++ P  ++T Y P    IA+S   + A+  QTLS Y   FA   +  G L+D +G
Sbjct: 20  LAVLGMLGPFSIDT-YIPAFSGIAQSIGATPAEMQQTLSAYLFGFAFMNLFHGALSDSFG 78

Query: 69  RRPTMLVGLLIYGSATFIAMQTDSFTILMLARVFSAFGIAVGSVVTQTILRDVFSGHELR 128
           RRP +L GL ++  A+     + + T L+L R         G VV++ ++RD+F   E +
Sbjct: 79  RRPVVLWGLAVFTLASLGCALSQNITQLVLFRGLQGLSTGAGIVVSRAVIRDMFPPAEAQ 138

Query: 129 KVFSLMGIGISISPVLGMLLGGQLAFAGGHQLVFLALFFIALVLFVYNLCQLPET--QQV 186
           +V S + I   ++P +  ++GG L    G   VF  L  + +VLF  N   LPET  +  
Sbjct: 139 RVMSQVTIYFGVAPAIAPIVGGFLFVHAGWHAVFWFLVAVGVVLFTANYKLLPETLHKDH 198

Query: 187 KPKIALGCLVA---RMFKDRQVLLSALLVALYNVALFSYYQLG-AFIFSDLGLDAEQFGY 242
           +    +  L+     +  D + LL A    +    +F Y     AF+   L L  +QF +
Sbjct: 199 RQPFQVRHLMRGYWDLCSDPRFLLLAFASGVPFNGMFLYVLAAPAFLGDHLALQPQQFFW 258

Query: 243 SGIALGLGSLIGSFLNKTLLAKQVPQRALLLLAALLLIMGTIGVSLTLDSIGFVAAMI-- 300
             +    G ++G+  +  +  K  P+R +     ++LI   + V         VA  +  
Sbjct: 259 FFLLTIGGIMLGARASGRMAGKVAPKRQIRDGFLIMLITSVVNVVANTFFQAHVAWALWP 318

Query: 301 LVVIAYGMAIPNILSTALV-----EYKSQAGSAGALFGLLYYLLIGSGLALTGLVQRLGV 355
           L V A+G A+   + T LV     E +  A S  A+ G     ++   +A   +   L +
Sbjct: 319 LAVFAFGWALMVPVVTLLVLDLHPERRGMASSLQAVIGSTANGIVAGAVAPLVMHSTLAL 378

Query: 356 VLLMCAGITL 365
            L   A + +
Sbjct: 379 ALTSMAMLAI 388