Pairwise Alignments

Query, 379 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 406 a.a., Multidrug resistance transporter, Bcr/CflA family from Variovorax sp. SCN45

 Score = 85.1 bits (209), Expect = 3e-21
 Identities = 95/382 (24%), Positives = 162/382 (42%), Gaps = 34/382 (8%)

Query: 9   LMVIMLMFPQIVETIYSPVLGSIARSFSVSDAQAAQTLSVYFLAFALGVVIWGVLADKWG 68
           L+ ++L    +    Y P L +IA+        A+ +L+++ LAF    ++ G LAD++G
Sbjct: 18  LLPLLLAAQPVATDSYLPALPAIAKELG----SASTSLTLFVLAFGFAQLLCGPLADRFG 73

Query: 69  RRPTMLVGLLIYGSATFIAMQTDSFTILMLARVFSAFGIAVGSVVTQTILRDVFSGHELR 128
           RRP +L GL  Y  A       DS  +L   R    F +A   V ++  +RD++  HE  
Sbjct: 74  RRPVLLAGLGCYVLAALGGAFADSVALLAGWRALQGFSMAAILVCSRAAVRDLYPAHEGP 133

Query: 129 KVFSLMGIGISISPVLGMLLGGQLAFAGGHQLVFLALFFIALVLFVYNLCQLPETQQVKP 188
            V +    G+ +  +L  LLG  L    G + V +A+   A VLF        ET++   
Sbjct: 134 HVMARGLTGLGVVGLLAPLLGAWLVQGAGWRWVMVAMAVYASVLFAMCWYSFAETRKPMG 193

Query: 189 KIALGC---LVARMFKDRQVLLSALLVALYNVALFSYYQLGAFIF-SDLGLDAEQFGYSG 244
           +  L         +F  R     A + A     LF +  L   ++   LG     +G+  
Sbjct: 194 EDGLSAPRGSTRTVFASRSFRAWASVAASTYGGLFCFLLLSPMVYIGYLGWSPAWYGWIP 253

Query: 245 IALGLGSLIGSFLNKTLLAKQVPQRALLLLAALLLIMGTIGVSLTLDSIG-FVAAMILVV 303
               L  +  + + +TLL +  P R  + L A L I G +     + ++G ++  +  V 
Sbjct: 254 AGGSLVYIFSTTMCRTLLRRYGPVRT-VRLGASLSITGAV-----IQALGCWLMPLSAVP 307

Query: 304 IAYGMAIPNILSTALVEYKSQAGSAGALFGLLYYLLIGSGLALTGLVQRLG--------- 354
           + +G A+   L   + +   QAG+ G L  L    +  SG  +  +   +G         
Sbjct: 308 LLFGHAV-YCLGHGIHQPCGQAGAVGDLPHLAGRAVSWSGFGMMMVAFCVGQLAARFVDA 366

Query: 355 ---------VVLLMCAGITLLA 367
                    VV ++ AGI+L+A
Sbjct: 367 DYSYGAWPMVVPMLLAGISLMA 388