Pairwise Alignments

Query, 379 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 404 a.a., Multidrug resistance transporter, Bcr/CflA family from Variovorax sp. SCN45

 Score = 99.0 bits (245), Expect = 2e-25
 Identities = 97/386 (25%), Positives = 181/386 (46%), Gaps = 30/386 (7%)

Query: 4   KPSLWLMVIMLMFPQIVETIYSPVLGSIARSFSVSDAQAAQTLSVYFLAFALGVVIWGVL 63
           K +L L ++  + P  ++ +Y P L +I +S          +L+ +FL+   G +++G +
Sbjct: 8   KMALLLGLLSAIGPFAID-MYLPALPAIGQSLHADIGAVQMSLTAFFLSLGAGQLLYGPI 66

Query: 64  ADKWGRRPTMLVGLLIYGSATF-IAMQTDSFTILMLARVFSAFGIAVGSVVTQTILRDVF 122
           +D  GR+P +  GL+++  A+   A+ TD  T+++L R     G A G  + + ++RD+ 
Sbjct: 67  SDMVGRKPPLYAGLVLFALASVGCAVATDIQTLIVL-RFVQGLGAAAGMAIPRAVVRDLH 125

Query: 123 SGHELRKVFSLMGIGISISPVLGMLLGGQLAFAGGHQLVFLALFFIALVLFVYNLCQLPE 182
           +G +  ++ SL+ +  S+SP+L  L G  +    G + VF A+   A+      +  L E
Sbjct: 126 TGTDAARLMSLLMLVFSVSPILAPLAGSAVIAFAGWRGVFWAVTIAAVAGLAMMVKLLDE 185

Query: 183 TQQVKPKI--ALGCLVAR---MFKDRQVLLSALLVALYNVALFSYYQLGAFIFSD-LGLD 236
           T+    ++  +LG  +A    + +DR  L    + +      F+Y    +F+  D  GL 
Sbjct: 186 TRPASERVESSLGSALAAYWLLLRDRHYLGLVFIGSFAMAGFFTYLANSSFVMIDHYGLS 245

Query: 237 AEQFGYSGIALGLGSLIGSFLNKTLLAKQVPQRALLLLAALLLIMGTI--GVSLTLDSIG 294
              +    +A G+ +   +F+  +     + +R  L+    L+  G +  GV++    I 
Sbjct: 246 PAMY---SVAFGVNA--AAFIAASQFTGSLGERYGLV---NLVKFGVVCCGVAMVAMFIY 297

Query: 295 FVAA----MILVVIAY------GMAIPNILSTALVEYKSQAGSAGALFGLLYYLLIGSGL 344
           F        +L+V+ +      G+ IP     AL  + + AG+A AL G L  L     +
Sbjct: 298 FATGGDNIWVLIVLYFIASGFMGLVIPTTGVLALEMHGAIAGTASALLGTLQMLTGALAM 357

Query: 345 ALTGLVQRLGVVLLMCAGITLLATLA 370
           A+ GL    G  L M AG+   A +A
Sbjct: 358 AVVGLFTD-GRPLPMVAGMAAGALIA 382