Pairwise Alignments

Query, 379 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  113 bits (283), Expect = 8e-30
 Identities = 88/353 (24%), Positives = 161/353 (45%), Gaps = 10/353 (2%)

Query: 19  IVETIYSPVLGSIARSFSVSDAQAAQTLSVYFLAFALGVVIWGVLADKWGRRPTMLVGLL 78
           I   +Y P    +  +F+    Q A +L+V+ +  ALG ++WG+ +DK+G R T++ GLL
Sbjct: 20  IATDMYLPAFKMMETAFATGPEQIALSLTVFLVGMALGQLLWGLASDKFGHRNTLIAGLL 79

Query: 79  IYGSATFIAMQTDSFTILMLARVFSAFGIAVGSVVTQTILRDVFSGHELRKVFSLMGIGI 138
           ++  A+     + +   L+L R   A G+   +V+ Q ++   +     +++F+ +   +
Sbjct: 80  VFTLASAGLAFSSTVWQLLLLRFIQAIGVCAPAVIWQAMVIKRYPSSVSQQLFATIMPLV 139

Query: 139 SISPVLGMLLGGQLAFAGGHQLVFLALFFIALVLFVYNLCQLPETQQVKPKIALGCLVAR 198
           ++SP L   LG  LA   G   +FL L  + +VL V    Q  E  + K   ++   +  
Sbjct: 140 ALSPALAPQLGVLLADYFGWHSIFLTLTLMGIVLVVSTGLQTNEIAEPK-TTSIAQDIKG 198

Query: 199 MFKDRQVLLSALLVALYNVALFSYYQLGAFIFSDLGLDAEQFGYSGIALGLGSLIGSFLN 258
           + K +  L + ++ A  + A F+Y      I + LG  A   G S I   +  ++G +L 
Sbjct: 199 LLKSKTYLGNVMMFACASAAFFAYLTGMPEIMAQLGYQARDIGLSFIPQTIAFMVGGYLG 258

Query: 259 KTLLAK---QVPQRALLLLAALLLIMGTIGVSLTLDSI-GFVAAMILVVIAYGMAIPNIL 314
           K  + K   ++  + L+ L  L   M  +    TL SI   +A   L+ +A G   P ++
Sbjct: 259 KKAVQKYGDELVLKQLIALFTLSAAMIFVASQWTLSSIWPILAPFCLIAVANGAMYPIVV 318

Query: 315 STALVEYKSQAGSAGALFGLLYYLLIGSGLALTGLVQR-----LGVVLLMCAG 362
           + AL   K    +A  L   L   +     AL   +        G+ +++C G
Sbjct: 319 NRALSSAKQSPATAAGLQNSLQISVSSLSSALVAAMASQAQPVTGIAIVLCTG 371