Pairwise Alignments

Query, 379 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 401 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  126 bits (317), Expect = 9e-34
 Identities = 94/341 (27%), Positives = 164/341 (48%), Gaps = 14/341 (4%)

Query: 23  IYSPVLGSIARSFSVSDAQAAQTLSVYFLAFALGVVIWGVLADKWGRRPTMLVGLLIYGS 82
           +Y P + +IAR F V+      TL+ Y   FA+G ++ G LAD +GRRP ML G+ ++G 
Sbjct: 35  MYLPAMPTIARDFGVNAGAVQITLTAYTAGFAIGQLLHGPLADSFGRRPVMLCGIFLFGI 94

Query: 83  ATFIAMQTDSFTILMLARVFSAFGIAVGSVVTQTILRDVFSGHELRKVFSLMGIGISISP 142
           A  ++  T+    L   R    F  A  +VV Q ++RD+F   +  +  S + + ++++P
Sbjct: 95  AAMVSATTNGIEALTYIRAAQGFAGAAAAVVIQAVVRDMFDREDFARAMSFVTLVVTLAP 154

Query: 143 VLGMLLGGQLAFAGGHQLVFLALFFIALVLFVYNLCQLPETQQVKPKIALGC-LVARMFK 201
           ++  ++GG LA   G + +F  L   A ++    + ++PET   + +  L      R + 
Sbjct: 155 LVAPMIGGHLAIWFGWRSIFWVLALFAALVIAMVMWKIPETLSPENRQPLRFRSTMRNYF 214

Query: 202 D---RQVLLSALLVALYNVA-LFSYYQLGAFIFSDL-GLDAEQFGYSGIALGLGSLIGSF 256
           D     V +  +    ++ A +F++   GAF++ D+ G+  + FGY    L + ++I   
Sbjct: 215 DLCKNPVAMGLIFSGAFSFAGMFAFLTAGAFVYIDIYGVSPDGFGYL-FGLNIVAMIALT 273

Query: 257 LNKTLLAKQVPQRALLLLAALLLIMGTIG--VSLTLD--SIGFVAAMILVVIAYGMAIPN 312
                  K++    +L  A  L +M  IG  VS  LD    G V  ++L V        N
Sbjct: 274 TINGRFVKKIGSHNMLRFALFLQLMAGIGLFVSWVLDWGLWGTVPFVVLFVGTISTIGSN 333

Query: 313 ILSTALVEYKSQAGSAGALFGLLYYLLIGSGLALTGLVQRL 353
            +   L +Y   AG+A +L G L +   G+G  +  +V  L
Sbjct: 334 SMGLLLSKYPRMAGTASSLAGTLRF---GTGSIIGAVVAAL 371