Pairwise Alignments

Query, 379 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  108 bits (270), Expect = 3e-28
 Identities = 92/369 (24%), Positives = 165/369 (44%), Gaps = 9/369 (2%)

Query: 3   TKPSLWLMVIMLMFPQIVETIYSPVLGSIARSFSVSDAQAAQTLSVYFLAFALGVVIWGV 62
           +K  + L+ ++++F  +   IY P L  I+++F V  A A  T++ +  A  +G +  G 
Sbjct: 10  SKQQMVLLTLLVLFSPLAIDIYLPALPQISQAFHVEHALAQDTITWFLFAMGVGQLFAGP 69

Query: 63  LADKWGRRPTMLVGLLIYGSATFIAMQTDSFTILMLARVFSAFGIAVGSVVTQTILRDVF 122
           LADK+GRR   L G+ IY  +  +A    S   +++AR+    G    SV     +RD+F
Sbjct: 70  LADKYGRRTVALGGISIYALSALLAWSAQSIEWMLMARLLQGLGACATSVAAFATVRDLF 129

Query: 123 SGHELRKVFSLMGIGISISPVLGMLLGGQLAFAGGHQLVFLALFFIALVLFVYNLCQLPE 182
                 K+ S +   I   P L  +LG  L    G +  F  +   AL++ +    +L E
Sbjct: 130 GPQRSGKMISYLNGAICFIPALAPILGSWLTQQFGWRANFSFMTGFALLVGLAMALRLQE 189

Query: 183 TQQV---KPKIALGCLVARMFKDRQVLLSALLVALYNVALFSYYQLGAFIFSD-LGLDAE 238
           +      +P +      A + K    L  A L  L    + +Y      I  + L L   
Sbjct: 190 SNPYMGSRPAVFKLSRYAAVLKAPTFLFHASLCLLAMAVILAYVTSAPVILMERLQLSMN 249

Query: 239 QFGYSGIALGLGSLIGSFLNKTLLAKQVPQRALLLLAALLLIMGTIGVSL--TLDSIGFV 296
           +F +      + ++I       ++ K   + +L++    L+I G++ + L     ++ F+
Sbjct: 250 EFTFWFGVNAVINIIACMTAPKVMDKLGTRWSLIIGITTLMIAGSLMLVLRNQASALAFM 309

Query: 297 AAMILVVIAYGMAIPNILSTALVEYKSQAGSAGALFGLLYYLLIGSGLALTGLVQRLGVV 356
             + L  I +   +      AL  +  +AG+A AL GL  + + GSGL L G +QR+   
Sbjct: 310 LPVFLSSIGFAWILGAAAGKALAPFGDKAGTAAALLGL--FQMSGSGL-LVGTLQRIMPE 366

Query: 357 LLMCAGITL 365
             +  G+T+
Sbjct: 367 PQLLIGLTM 375