Pairwise Alignments

Query, 379 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 423 a.a., MFS family multidrug efflux protein, similarity to bicyclomycin resistance protein Bcr from Sphingobium sp. HT1-2

 Score = 89.0 bits (219), Expect = 2e-22
 Identities = 77/324 (23%), Positives = 153/324 (47%), Gaps = 18/324 (5%)

Query: 26  PVLGSIARSFSVSDAQAAQTL-SVYFLAFALGVVIWGVLADKWGRRPTMLVGLLIYGSAT 84
           P L  I R   +++    Q + S YF+   +G +++GVL+D++GR+  +   ++++  ++
Sbjct: 41  PALPDIGRDLHIANPNDRQLIISFYFMGLGVGSLLFGVLSDQFGRKKVLGGAMILFILSS 100

Query: 85  FIAMQTDSFTILMLARVFSAFGIAVGSVVTQTILRDVFSGHELRKVFSLMGIGISISPVL 144
                  SFT+L++AR  + F      V+T  I+RD F G  + +V SL+     + PV+
Sbjct: 101 IACAGAHSFTMLLIARTSAGFFAGASRVITVGIIRDRFKGDAMARVMSLIFAVFMLIPVM 160

Query: 145 GMLLGGQLAFAGGHQLVFLALFFIALVLFVYNLCQLPETQ------QVKPKIALGCLVAR 198
               G  + +    + +F  L  +A  +  +   +LPET       ++ P+  L   V  
Sbjct: 161 APTFGQAILWIAPWRWIFWVLAILATGILGWMAIRLPETLHPDNRIRINPRTILQ-TVGT 219

Query: 199 MFKDRQ----VLLSALLVALYNVALFSYYQLGAFIFSDLGLDAEQFGYSGIALGLGSLIG 254
           +F+ R     +L S ++++     + S  Q+   +F    +    F     ++G+GSL+ 
Sbjct: 220 IFRTRSSIGYMLASGVVMSGLIGFILSVQQIFFDVFHAQKIFPLAFATIAGSMGIGSLVN 279

Query: 255 SFLNKTLLAKQVPQRAL---LLLAALLLIMGTIGVSLTLDSIGFVAAMILVVIAYGMAIP 311
           S L     A+++ Q AL   +L+AA+ L +   G   T+ +   + AM ++ +A+     
Sbjct: 280 SRLVSRFGARRLSQSALIAFILIAAVHLAVILAGQE-TIVTFMVLQAMTMMTVAF--TAS 336

Query: 312 NILSTALVEYKSQAGSAGALFGLL 335
           N  + ++  +   AG A +    L
Sbjct: 337 NFSAISMEPFSKGAGVASSFQAFL 360