Pairwise Alignments

Query, 379 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 412 a.a., Multidrug resistance transporter, Bcr/CflA family from Pseudomonas putida KT2440

 Score =  116 bits (291), Expect = 1e-30
 Identities = 95/348 (27%), Positives = 162/348 (46%), Gaps = 22/348 (6%)

Query: 3   TKPSLWLMVIMLMFPQIVETIYSPVLGSIARSFSVSDAQAAQTLSVYFLAFALGVVIWGV 62
           T   + L+  +     +   I  P    +AR  +VS  +   TLS +F+ FA   ++ G 
Sbjct: 23  TAKVILLLAALAAISNLSTNIILPAFPEMARQLNVSSQELGLTLSSFFITFAFAQLLVGP 82

Query: 63  LADKWGRRPTMLVGLLIYGSATFIAMQTDSFTILMLARVFSAFGIAVGSVVTQTILRDVF 122
           LAD++GR+  ++ GL+I+   TF A    +  +L+L RV  A G+   +V+ + I RD++
Sbjct: 83  LADRYGRKRLVVGGLMIFVVGTFWAANAATLDMLILGRVIQAIGVCAAAVLARAIARDLY 142

Query: 123 SGHELRKVFSLMGIGISISPVLGMLLGGQLAFAGGHQLVFLALFFIALVLFVYNLCQLPE 182
            G  L +  SL  I  + +P    L+G  L    G + +F+A+   A+++ ++ L  + E
Sbjct: 143 EGENLARALSLTMIAAATAPGFSPLIGSMLNTTLGWRALFIAVGMSAILIALFYLRGIGE 202

Query: 183 TQQVKPKI-----ALGCLVARMFKDRQVLLSALLVALYNVALF-SYYQLGAFIFSDLGLD 236
           T     ++     A+     ++  +R  +L AL  +L    LF S+    + +   +GL 
Sbjct: 203 TLPAHRRVTQSVPAILIAYGKLASNRLFILPALATSLLMSGLFASFAAAPSILMEGMGLS 262

Query: 237 AEQFGYSGIALGLGSLIGSFLNKTLLAKQVPQRALLL-------LAALLLIMGTIGVSLT 289
           + Q G    A  +  +  + L    LA +   RA+ L        A  LL++G    SL 
Sbjct: 263 SLQVGLY-FAATVFVVFAAGLAAPRLAHRWGSRAITLSGLATACTAGALLLVGPSNPSLG 321

Query: 290 LDSIGFVAAMILVVIAYGMAIPNILSTAL--VEYKSQAGSAGALFGLL 335
             S+       +V+  +GM I N L TAL    +  +AG A AL G L
Sbjct: 322 WYSLS------MVLFLWGMGIANPLGTALTMTPFGKEAGLASALLGFL 363