Pairwise Alignments

Query, 379 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 396 a.a., MFS family multidrug transport protein, bicyclomycin resistance protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  113 bits (282), Expect = 1e-29
 Identities = 97/384 (25%), Positives = 177/384 (46%), Gaps = 22/384 (5%)

Query: 7   LWLMVIMLMFPQIVETIYSPVLGSIARSFSVSDAQAAQTLSVYFLAFALGVVIWGVLADK 66
           ++++ ++ M   +   +Y P L  I+  F V    A  TLS Y L FALG +I+G +AD 
Sbjct: 12  VFILGLLAMLMPLSIDMYLPALPVISAQFGVPAGSAQMTLSTYILGFALGQLIYGPMADS 71

Query: 67  WGRRPTMLVGLLIYGSATFIAMQTDSFTILMLARVFSAFGIAVGSVVTQTILRDVFSGHE 126
            GR+P +L G L++ +A        +   L++ R F     A  SVV   ++RD++   E
Sbjct: 72  LGRKPVILGGTLVFAAAAVACALAQTIDQLIVMRFFHGLAAAAASVVINALMRDIYPKEE 131

Query: 127 LRKVFSLMGIGISISPVLGMLLGGQLAFAGGHQLVFLALFFIALVLFVYNLCQLPETQQV 186
             ++ S + +  +I+P++  ++GG +        +F  L   A++  V     + ET  V
Sbjct: 132 FSRMMSFVMLVTTIAPLMAPIVGGWVLVWLSWHYIFWILAIAAILASVMIFALIKETLPV 191

Query: 187 KP------KIALGCLVARMFKDRQVLLSALLVALYNVALFSYYQLGAFIFSDLG-LDAEQ 239
           +       +  +G   A +F+ ++VL   L        +FS+   G F++ ++  +  + 
Sbjct: 192 ERRQPFHIRTTIGNFAA-LFRHKRVLSYMLASGFSFAGMFSFLSAGPFVYIEINHVPPQD 250

Query: 240 FGYSGIALGLGSLIGSFLNKTLLAKQVPQRALLLLAALLLIMGTIGVSL---TLDSIGFV 296
           FGY   AL +  L    +  +   ++V   AL +  A L I   + V +    L  IGF 
Sbjct: 251 FGYY-FALNIVFLFVMTIINSRFVRRV--GALNMFRAGLWIQFAMAVWMVFSALMGIGFW 307

Query: 297 AAMILVVIAYG---MAIPNILSTALVEYKSQAGSAGALFGLLYY---LLIGSGLALTGLV 350
           A ++ V    G   M   N ++  L E+   AG+A +L G   +    ++G+ L+L    
Sbjct: 308 ALVVGVAAFVGCVSMVSSNAMAVILDEFPHMAGTASSLAGTFRFGIGAIVGALLSLATFN 367

Query: 351 QRLGVV--LLMCAGITLLATLARS 372
               ++  + +CA  ++L  L  S
Sbjct: 368 SAWPMIWSIALCAACSILFYLYAS 391