Pairwise Alignments

Query, 379 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 386 a.a., Multidrug resistance protein D from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  119 bits (298), Expect = 1e-31
 Identities = 104/375 (27%), Positives = 174/375 (46%), Gaps = 20/375 (5%)

Query: 7   LWLMVIMLMFPQIVETIYSPVLGSIARSFSVSDAQAAQTLSVYFLAFALGVVIWGVLADK 66
           L ++V+++   Q+ +TIY P +  +A++ +V +      ++ Y L + +  + +G L+D+
Sbjct: 2   LLMLVLLVAVGQMAQTIYIPAIADMAQALNVREGAVQSVMAAYLLTYGVSQLFYGPLSDR 61

Query: 67  WGRRPTMLVGLLIYGSATFIAMQTDSFTILMLARVFSAFGIAVGSVVTQTILRDVFSGHE 126
            GRRP +LVG+ I+  AT  AM T S T+L+ A      G  VG V+ +T+ RD++ G +
Sbjct: 62  VGRRPVILVGMSIFMVATLFAMTTHSLTVLIAASAMQGMGTGVGGVMARTLPRDLYEGTQ 121

Query: 127 LRKVFSLMGIGISISPVLGMLLGGQLAFAGGHQLVFLALFFIALVLFVYNLCQLPETQQV 186
           LR   SL+ +GI +SP+L  L+G  L      +  +  L  +   +       +PET+  
Sbjct: 122 LRHANSLLNMGILVSPLLAPLIGSLLDTLWNWRACYAFLLVLCAGVTFSMARWMPETRPA 181

Query: 187 -KPKIALGCLVARMFKDR--QVLLSALLVALYNVALFSYYQLGAFIFSDLGLDAEQFGYS 243
             P+  L      +F +      L  L+  L  +A+F     G  + + LGL +      
Sbjct: 182 GAPRTRLIASYKTLFGNGAFNCYLLMLIGGLAGIAVFEACS-GVLMGAVLGLSSMVVSIL 240

Query: 244 GI----ALGLGSLIGSFLNKTLLAKQVPQRALLLLAALLL-IMGTIGVSLTLDSIGFVAA 298
            I    A   G+      NK             LLA L++ I G  GV   ++    +  
Sbjct: 241 FILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLMMWIPGWFGV---MNVWTLLIP 297

Query: 299 MILVVIAYGMAIPNILSTALVEYKSQAGSAGALFGLLYYLLIGSGLA--LTGLVQRLGV- 355
             L     GM  P   S A+  +   AG+AGAL G L    IGSG+   L+ ++ + G  
Sbjct: 298 AALFFFGAGMLFPLATSGAMEPFPFLAGTAGALVGGLQN--IGSGVLAWLSAMLPQTGQG 355

Query: 356 ---VLLMCAGITLLA 367
              +L+   G+ +LA
Sbjct: 356 SLGLLMTLMGLLILA 370