Pairwise Alignments

Query, 379 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 394 a.a., Bcr/CflA family multidrug efflux MFS transporter from Erwinia tracheiphila SCR3

 Score =  122 bits (307), Expect = 1e-32
 Identities = 101/384 (26%), Positives = 182/384 (47%), Gaps = 21/384 (5%)

Query: 6   SLWLMVIM----LMFPQIVETIYSPVLGSIARSFSVSDAQAAQTLSVYFLAFALGVVIWG 61
           SL L+VI+    ++ P  ++ +Y P L  IAR F V+      TL++Y L FALG +++G
Sbjct: 4   SLGLVVILGLLAMLMPLSID-MYLPALPEIAREFGVTAGSVQMTLNIYILGFALGQLVYG 62

Query: 62  VLADKWGRRPTMLVGLLIYGSATFIAMQTDSFTILMLARVFSAFGIAVGSVVTQTILRDV 121
            LAD +GR+P + +G LI+  A        +   L++ R+      A GSVV+  ++RD 
Sbjct: 63  PLADSFGRKPLISLGTLIFSVAAAACAMAQTIDQLIVMRLLHGLSAAAGSVVSSALMRDC 122

Query: 122 FSGHELRKVFSLMGIGISISPVLGMLLGGQLAFAGGHQLVFLALFFIALVLFVYNLCQLP 181
           +S  E  ++ S M +  +I+P+L  ++GG L        +F  L  +A+V  +    Q+ 
Sbjct: 123 YSKEEFSRMMSFMMMVTTIAPLLAPIIGGWLLQIWSWHAIFWTLSMVAVVTTIMVATQIR 182

Query: 182 ET--QQVKPKIALGCLVAR---MFKDRQVLLSALLVALYNVALFSYYQLGAFIFSDLG-L 235
           ET     + K  L   +     + + RQ     L   L    +FS+   G F++ +L  +
Sbjct: 183 ETLPADKRQKFNLWTTLINFLYLVRHRQAFSYMLASGLSFAGMFSFLNAGPFVYIELNHI 242

Query: 236 DAEQFGY----SGIALGLGSLIGSFLNKTLLAKQVPQRALLLLAALLLIMGTIGVSLTLD 291
             + FGY    + + L L +L+ S   +      + +  L +  A+ L +  +  +L L 
Sbjct: 243 SPQDFGYYFALNVVFLFLMTLVNSRSVRRFGPVIMFRFGLSVQFAMALWLVVVS-ALNLG 301

Query: 292 SIGFVAAMILVVIAYGMAIPNILSTALVEYKSQAGSAGALFGLLYY---LLIGSGLALTG 348
            +  V  + + +    M   N ++  L E+   AG+A +L G L +    L G+ L+   
Sbjct: 302 FLPLVFGVAMYIGCVAMVSSNAMAVILEEFPHMAGTASSLAGALRFGVGALTGALLSTFT 361

Query: 349 LVQRLGVV--LLMCAGITLLATLA 370
                 +V  + +CA +++L  +A
Sbjct: 362 FTDAWPMVGSIFICASLSVLLFMA 385