Pairwise Alignments

Query, 379 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 391 a.a., Arabinose efflux permease from Enterobacter asburiae PDN3

 Score = 98.6 bits (244), Expect = 3e-25
 Identities = 89/375 (23%), Positives = 163/375 (43%), Gaps = 16/375 (4%)

Query: 12  IMLMFPQIVETIYSPVLGSIARSFSVSDAQAAQTLSVYFLAFALGVVIWGVLADKWGRRP 71
           ++L++P  ++ +Y   L  IAR    S+AQ     S Y    A  +V  G +ADK GR+P
Sbjct: 11  LVLLYPSGID-MYLVGLPHIARDLGASEAQLHIAFSAYLAGMASSMVFAGKIADKAGRQP 69

Query: 72  TMLVGLLIYGSATFIAMQTDSFTILMLARVFSAFGIAVGSVVTQTILRDVFSGHELRKVF 131
             + G +I+  A+ +  Q  S T+ +  R     G     VV   ILRD  S     KV 
Sbjct: 70  VAITGAIIFALASLLCSQAQSSTVFLAGRFIQGIGAGGCYVVAFAILRDTLSAQRRAKVL 129

Query: 132 SLMGIGISISPVLGMLLGGQLAFAGGHQLVFLALFFIALVLFVYNLCQLPETQQVKPKIA 191
           S++     I PVL  ++G  +      Q +F  +  +  ++F+ ++  L ET        
Sbjct: 130 SMLNGITCIIPVLAPVVGYLIMLKFPWQSLFWTMAAMGALVFILSISVLKETHPGSQNTG 189

Query: 192 LGCLVARMFK-DRQVLLSALLVALYNVA-LFSYYQLG-AFIFSDLGLDAEQFGYSGIALG 248
               +    K   +  LS L V   +VA + +Y  +    +   +G D  ++        
Sbjct: 190 HTATIHPAEKLLNRFFLSRLAVTTLSVAVILTYVNVSPVLLMETMGFDRGEYSTVMALTA 249

Query: 249 LGSLIGSFLNKTLLAKQVPQRALLLLAALLLIMGTIGVSLTLDSIGFVAAMILVVIAYGM 308
           + S+  SF     L     QRAL+L + +L +  +  ++        +A + L+   + +
Sbjct: 250 MVSMAVSFSTPFAL-NVFSQRALMLTSQVLFLTASAILATASSHAVMLAGITLICAGFSV 308

Query: 309 AIPNILSTALVEYKSQAGSAGALFGLL------YYLLIGSGLALTGLVQRLGVVL---LM 359
                +S AL  +  +AG A ++ G+        ++ + + + L  L   +GV++   ++
Sbjct: 309 GFGVAMSQALGPFSLRAGVASSVLGIAQVCGSSLWIWLAAVIGLNALNMLIGVLIGCSIL 368

Query: 360 CAGITLLATLARSSH 374
           C  ITLL  +  ++H
Sbjct: 369 C--ITLLMVIQPAAH 381