Pairwise Alignments

Query, 379 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 400 a.a., multidrug effflux MFS transporter from Dickeya dianthicola ME23

 Score =  118 bits (296), Expect = 3e-31
 Identities = 97/359 (27%), Positives = 164/359 (45%), Gaps = 11/359 (3%)

Query: 23  IYSPVLGSIARSFSVSDAQAAQTLSVYFLAFALGVVIWGVLADKWGRRPTMLVGLLIYGS 82
           +Y P L  +  + + S A    +L+   L    G +I+G L+DK GRR  +L+ L +   
Sbjct: 29  LYLPALPQMTGALAASTAVTQLSLTAGLLGLGAGQLIFGPLSDKLGRRRPLLLSLTMLLL 88

Query: 83  ATFIAMQTDSFTILMLARVFSAFGIAVGSVVTQTILRDVFSGHELRKVFSLMGIGISISP 142
            +           L++AR+      A G+V+++ I RD++ GH L + FSL+ +   ++P
Sbjct: 89  TSVWCALAQDIGQLIVARLLQGIAGAGGAVLSRAIARDLYVGHALTRFFSLLMLINGLAP 148

Query: 143 VLGMLLGGQLAFAGGHQLVFLALFFIALVLFVYNLCQLPETQQVKPKIALG-----CLVA 197
           +L  +LGG L      + +F+ L  IA +L   ++ +L ET   + +IA G       + 
Sbjct: 149 ILSPVLGGVLLGVTDWRGIFVLLAVIACLLLTMSVLRLNETLPAERRIAGGVGSMLSSLG 208

Query: 198 RMFKDRQVLLSALLVALYNVALFSYYQLGAFIFSDL-GLDAEQFGYSGIALGLGSLIGSF 256
            + ++R  +   L   L    +F+Y     F+  ++ GL  + F     A G+G +    
Sbjct: 209 SLLRERTFMGLCLAQGLCGAGMFAYIGASPFVLQEVYGLSPQAFSLCFAANGIGLIAAGQ 268

Query: 257 LNKTLLAKQVPQRAL---LLLAALLLIMGTIGVSLTLDSIGFVAAMILVVIAYGMAIPNI 313
           L      +   QR L   L++A +  +  T    L    IG +  +   +   G+  P  
Sbjct: 269 LASHFSQRFGEQRVLLTGLIIAVISALALTAAGLLHAPLIGILIPLFFAIAMIGIVGPCA 328

Query: 314 LSTALVEYKSQAGSAGALFGLLYYLLIGSGLALTGLVQRLGV--VLLMCAGITLLATLA 370
            S A+    ++AGSA AL GL  +L     + LTGL     V  + L+  G  LLA LA
Sbjct: 329 SSLAMQSQGNKAGSASALLGLNMFLFGALSVPLTGLAGSTSVLSMALVILGCYLLAALA 387