Pairwise Alignments

Query, 379 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 399 a.a., multidrug effflux MFS transporter from Dickeya dadantii 3937

 Score =  119 bits (297), Expect = 2e-31
 Identities = 94/369 (25%), Positives = 180/369 (48%), Gaps = 26/369 (7%)

Query: 2   KTKPSLWLMVIM---LMFPQIVETIYSPVLGSIARSFSVSDAQAAQTLSVYFLAFALGVV 58
           K  P L+ + I+   + F  +   IY P +  + +           T++ + + F +  +
Sbjct: 9   KKIPELFFIAILSALMAFTSLSTDIYLPAMPIMGKDLQ---GDVELTITGFLIGFCIAQL 65

Query: 59  IWGVLADKWGRRPTMLVGLLIYGSATFIAMQTDSFTILMLARVFSAFGIAVGSVVTQTIL 118
           IWG L+D WGRR  + +G+ ++   +     + + + ++  R+F A G   G ++ + ++
Sbjct: 66  IWGPLSDHWGRRVPLFIGMALFIVGSVGCALSTTISQIVFWRIFQALGACTGPMLARAMI 125

Query: 119 RDVFSGHELRKVFSLMGIGISISPVLGMLLGGQLAFAGGHQLVFLALFFIALVLFVYNLC 178
           RD+FS     ++ S + I ++I+P+ G LLGGQL        +F  L  I L++F+ +L 
Sbjct: 126 RDLFSRVRAAQMLSTLIIIMAIAPIAGPLLGGQLINVTSWHSIFWLLAVIGLLMFI-SLY 184

Query: 179 QLPETQQVKPKIALGCLVARMFKDRQVLLS-------ALLVALYNVALFSYYQLGAFIF- 230
            LPET     ++     ++  F++   LL+        L +  Y VA +++    AF++ 
Sbjct: 185 WLPETLPEDKRVKAS--LSSAFRNYYALLTNTAFMRFTLCLTSYYVAAYAFITGSAFVYI 242

Query: 231 SDLGLDAEQFGYSGIALGLGSLIG-SFLNKTLLAKQVPQRAL---LLLAALLLIMGTIGV 286
           +  G+  + +G+   AL +  ++G S +N+ L+ +   +R L   +L+AA+  +   IG 
Sbjct: 243 TYFGVAPQHYGWL-FALNIVGVVGMSIVNRRLVQRYPLERLLKFAVLIAAVASLFLAIGT 301

Query: 287 SLTLDSIGFVAAMILVVIAY-GMAIPNILSTALVEYKSQAGSAGALFGLLYYLLIGSGLA 345
            L +  I  +   + +  +  G+      + AL    + AGSA AL G L Y   GSG+ 
Sbjct: 302 KLNIGGIILIVVAVFIFFSMNGIIAATSTAAALDAVPNIAGSASALIGSLQY---GSGII 358

Query: 346 LTGLVQRLG 354
            + L+  LG
Sbjct: 359 SSLLLALLG 367