Pairwise Alignments

Query, 379 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 396 a.a., bicyclomycin/cysteine/sulfonamide efflux transporter from Escherichia coli BL21

 Score =  111 bits (277), Expect = 4e-29
 Identities = 89/357 (24%), Positives = 174/357 (48%), Gaps = 22/357 (6%)

Query: 7   LWLMVIMLMFPQIVETIYSPVLGSIARSFSVSDAQAAQTLSVYFLAFALGVVIWGVLADK 66
           ++++ ++ M   +   +Y P L  I+  F V       TLS Y L FALG +I+G +AD 
Sbjct: 12  VFILGLLAMLMPLSIDMYLPALPVISAQFGVPAGSTQMTLSTYILGFALGQLIYGPMADS 71

Query: 67  WGRRPTMLVGLLIYGSATFIAMQTDSFTILMLARVFSAFGIAVGSVVTQTILRDVFSGHE 126
           +GR+P +L G L++ +A       ++   L++ R F     A  SVV   ++RD++   E
Sbjct: 72  FGRKPVVLGGTLVFAAAAVACALANTIDQLIVMRFFHGLAAAAASVVINALMRDIYPKEE 131

Query: 127 LRKVFSLMGIGISISPVLGMLLGG-QLAFAGGHQLVFL----ALFFIALVLFVYNLCQLP 181
             ++ S + +  +I+P++  ++GG  L +   H + ++    A+   A++ F+      P
Sbjct: 132 FSRMMSFVMLVTTIAPLMAPIVGGWVLVWLSWHYIFWILALAAILASAMIFFLIKETLPP 191

Query: 182 ETQQ-VKPKIALGCLVARMFKDRQVLLSALLVALYNVALFSYYQLGAFIFSDLG-LDAEQ 239
           E +Q    +  +G   A +F+ ++VL   L        +FS+   G F++ ++  +  E 
Sbjct: 192 ERRQPFHIRTTIGNFAA-LFRHKRVLSYMLASGFSFAGMFSFLSAGPFVYIEINHVAPEN 250

Query: 240 FGY----SGIALGLGSLIGSFLNKTLLAKQVPQRAL---LLLAALLLIMGTIGVSLTLDS 292
           FGY    + + L + ++  S   + + A  + +  L    ++AA ++I   +G+      
Sbjct: 251 FGYYFALNIVFLFVMTIFNSRFVRRIGALNMFRSGLWIQFIMAAWMVISALLGLGFWSLV 310

Query: 293 IGFVAAMILVVIAYGMAIPNILSTALVEYKSQAGSAGALFGLLYY---LLIGSGLAL 346
           +G VAA +  V    M   N ++  L E+   AG+A +L G   +    ++G+ L+L
Sbjct: 311 VG-VAAFVGCV---SMVSSNAMAVILDEFPHMAGTASSLAGTFRFGIGAIVGALLSL 363