Pairwise Alignments

Query, 257 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 262 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 94.7 bits (234), Expect = 2e-24
 Identities = 65/218 (29%), Positives = 99/218 (45%), Gaps = 2/218 (0%)

Query: 34  HQHQKGQLLFAPQGCIRFALDDSICILPPTKAVWIPSGTRHRAIMTNVVAYRSIYFDCHA 93
           HQH  G L ++  G +R  +  +  + PP  AVW+P  T H +     + Y S+      
Sbjct: 34  HQHFWGSLDYSASGVMRMEVAGNRFMSPPQYAVWVPPHTEHSSYNAEAIVYHSVGLAPEL 93

Query: 94  F-KCPDHITMIEVNALLKALIDKMALWSWDTPQESMN-NTTTLFWEEFYAAQRQTFHLPL 151
             + P     + ++ +LKA++   A    + PQ   +     +  ++   A      LP 
Sbjct: 94  CERLPQQPCTLAISDILKAILSDFAQRDVNMPQTDADIRLAQVLVDQLKQAPIHDCFLPY 153

Query: 152 PTNRRFKVFRKQLMQATFFAPDLVSLANSVGASSKTVTRLFKAETGMSYQEWKQQWRLLK 211
             +       + L         L   A  V  S +T+ RLF  E GMS+ EW+Q+ R L 
Sbjct: 154 ARHPGLLGVLEGLQADPADNRPLAHWAEQVHVSERTLARLFVRELGMSFGEWRQRLRYLA 213

Query: 212 AIELLSKETPVNQVSDWLGFSSDSAFIAFFKKQTGQTP 249
           AIE L  +  V  V+  LG+SS SAFIA F++Q G TP
Sbjct: 214 AIEALDSQRSVQHVAFDLGYSSASAFIAMFQRQAGCTP 251