Pairwise Alignments

Query, 257 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 262 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  103 bits (257), Expect = 4e-27
 Identities = 70/243 (28%), Positives = 116/243 (47%), Gaps = 3/243 (1%)

Query: 15  LPACVVGIAADIGNHD-SGLHQHQKGQLLFAPQGCIRFALDDSICILPPTKAVWIPSGTR 73
           LP  V G    + N   +  H H   QL +A  G +         + PP +AVWIP+G  
Sbjct: 20  LPRPVYGRTESLPNRALTRRHSHPWVQLSYAISGVLEIQTSVGRFVAPPQRAVWIPAGVP 79

Query: 74  HRAIMTNVVAYRSIYFDCHAFK-CPDHITMIEVNALLKALIDKMALWSWDTPQESMNNTT 132
           HR   +     RS+Y DC       +   ++EV++LL+ LI   +    +  ++  +   
Sbjct: 80  HRVFSSPHTEMRSLYLDCSVTAWAVERCHVLEVSSLLRELIRSFSELPVEYAEDGPDGRL 139

Query: 133 T-LFWEEFYAAQRQTFHLPLPTNRRFKVFRKQLMQATFFAPDLVSLANSVGASSKTVTRL 191
             +  ++  AA +    LPLP + R +   + L         L   +  +G S KT++RL
Sbjct: 140 AQVVLDQLAAAPQVDLMLPLPLDPRLRHIYRSLNLRPEQQTTLSQWSQKLGVSEKTLSRL 199

Query: 192 FKAETGMSYQEWKQQWRLLKAIELLSKETPVNQVSDWLGFSSDSAFIAFFKKQTGQTPLS 251
           F ++TG++++ W+Q+ RLL A+  L +   V  V+   G+ S SAFI  F++Q   TP  
Sbjct: 200 FLSDTGLTFRAWRQRLRLLTALPALEQGERVTDVALACGYESTSAFINAFRQQFEATPGE 259

Query: 252 FIK 254
           F +
Sbjct: 260 FFR 262