Pairwise Alignments

Query, 257 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 288 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  104 bits (260), Expect = 2e-27
 Identities = 73/253 (28%), Positives = 118/253 (46%), Gaps = 10/253 (3%)

Query: 11  DPDRLPACVVGIAADIGNH--DSGLHQHQKGQLLFAPQGCIRFALDDSICILPPTKAVWI 68
           D D LP  VV + A   +   +   H H+KGQL++  +G I   ++  I I+PP  A+WI
Sbjct: 16  DADLLPRAVVAVNATSTSESWEHAPHSHRKGQLMYTLRGVIHCQIEAGIWIVPPQCALWI 75

Query: 69  PSGTRHRAIMTNVVAYRSIYFDCHAFKC-PDHITMIEVNALLKALIDKMA----LWSWDT 123
           P G  H A  +       +  D  A    P     + V+ LL  LI K      L+  D 
Sbjct: 76  PGGLPHAARGSGEAEVYCLLIDPDAAGALPAQCCTLSVSGLLHELISKAVSFPQLYDEDG 135

Query: 124 PQESMNNTTTLFWEEFYAAQRQTFHLPLPTNRRFKVFRKQLMQATFFAPDLVSLANSVGA 183
            Q  +  T     +E   A  +  HLP+P + R +     L+        L   A  +G 
Sbjct: 136 AQGRLIRTLL---DELAQAPIEDLHLPMPRDPRLRRLADSLLADPGDKATLGQWAMRIGM 192

Query: 184 SSKTVTRLFKAETGMSYQEWKQQWRLLKAIELLSKETPVNQVSDWLGFSSDSAFIAFFKK 243
           S +++TRL   E G+S+  W++Q  ++ +++ L++   V +V+  LG+ + S FI  F+K
Sbjct: 193 SERSMTRLLLEEFGLSFGRWRRQLHVILSLQRLARGDSVQRVALDLGYENASGFITMFRK 252

Query: 244 QTGQTPLSFIKIR 256
             GQ P  ++  R
Sbjct: 253 AVGQPPARYLADR 265