Pairwise Alignments

Query, 257 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 273 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 95.9 bits (237), Expect = 8e-25
 Identities = 63/223 (28%), Positives = 103/223 (46%), Gaps = 2/223 (0%)

Query: 34  HQHQKGQLLFAPQGCIRFALDDSICILPPTKAVWIPSGTRHRAIMTNVVAYRSIYFDCHA 93
           H H+K QLL+A +G +      +   +PP + +W+P+G  H       +  RS++     
Sbjct: 51  HSHEKHQLLYAIEGVMVVYSALNQWTVPPNRGIWMPAGQVHSLRCVGTLKMRSVFVRPDR 110

Query: 94  F-KCPDHITMIEVNALLKALIDKMALWSWDTPQESMN-NTTTLFWEEFYAAQRQTFHLPL 151
           F   P     + ++ LL  LI           ++S +     L  +E          LP 
Sbjct: 111 FPNMPGEPKTVSISPLLSELIKASVSLKPPYAEDSRDARIMHLILDELAILPALPLSLPQ 170

Query: 152 PTNRRFKVFRKQLMQATFFAPDLVSLANSVGASSKTVTRLFKAETGMSYQEWKQQWRLLK 211
           P + R +     L      A  +   +  +    KT+ RLF+ ETGM++ +W+QQ RLL 
Sbjct: 171 PADPRLQRICLALQDEPGDASTVAHWSERLSLDQKTIQRLFRKETGMTFGQWRQQARLLL 230

Query: 212 AIELLSKETPVNQVSDWLGFSSDSAFIAFFKKQTGQTPLSFIK 254
           A+E ++    V  ++  LG+ S SAF + FKKQ G+TP  F +
Sbjct: 231 ALERIAVGEKVIDIALELGYESPSAFTSMFKKQFGKTPSHFFR 273