Pairwise Alignments

Query, 257 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 271 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  130 bits (326), Expect = 4e-35
 Identities = 78/222 (35%), Positives = 119/222 (53%), Gaps = 2/222 (0%)

Query: 34  HQHQKGQLLFAPQGCIRFALDDSICILPPTKAVWIPSGTRHRAIMTNVVAYRSIYFDCHA 93
           H H+ GQLL+A  G +R     S+  LPP +A+WIP+   H  +M   V  RSIY    A
Sbjct: 47  HTHRHGQLLYAVSGVMRAVAQGSLWFLPPKRALWIPAEEEHDQLMLTPVQMRSIYIQADA 106

Query: 94  FK-CPDHITMIEVNALLKALIDKMALWSWDTPQESMNN-TTTLFWEEFYAAQRQTFHLPL 151
                D   +++V+ LL+ LI  +A    +   E  N+    L   E  AA+     +P 
Sbjct: 107 AAGFGDRCRIVDVSLLLRELILVLANEPIEYELEGRNSHVVALILSELAAARTLPLQIPW 166

Query: 152 PTNRRFKVFRKQLMQATFFAPDLVSLANSVGASSKTVTRLFKAETGMSYQEWKQQWRLLK 211
           P +RR  V  + +++A      +   A+ VGASS+T+ RLF  ETG++Y++W QQ RL  
Sbjct: 167 PVDRRLLVVCRAILEAPGQTHRVEYWADQVGASSRTLIRLFLKETGLTYRQWVQQVRLAC 226

Query: 212 AIELLSKETPVNQVSDWLGFSSDSAFIAFFKKQTGQTPLSFI 253
           A+E L    P+ +++  LG+ S SAF A F++  G +P  F+
Sbjct: 227 ALERLENGEPIGRIAQDLGYVSASAFSAMFRRAIGVSPRDFL 268