Pairwise Alignments

Query, 257 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 262 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score = 94.0 bits (232), Expect = 3e-24
 Identities = 66/241 (27%), Positives = 114/241 (47%), Gaps = 3/241 (1%)

Query: 16  PACVVGIAAD-IGNHDSGLHQHQKGQLLFAPQGCIRFALDDSICILPPTKAVWIPSGTRH 74
           P  V  +A D  G+     H H++GQL+ A  G +  +      ++P  + VW+P+G  H
Sbjct: 16  PRAVAVLATDPAGDAFIPPHTHRRGQLIHAISGVMLVSAVAGSWVVPTGRGVWVPAGMEH 75

Query: 75  RAIMTNVVAYRSIYFDCHA-FKCPDHITMIEVNALLKALIDKMALWSWD-TPQESMNNTT 132
           +  M   V  R+++ +            +I V ALL+ LI        D  P        
Sbjct: 76  QIRMAGEVKMRTVFVEPGTRADLGAECRVIHVGALLRELIVTAVALPLDYAPGGRDERVM 135

Query: 133 TLFWEEFYAAQRQTFHLPLPTNRRFKVFRKQLMQATFFAPDLVSLANSVGASSKTVTRLF 192
            L  +E  AA   + H+P+P + R  V  ++L++       L   A  +  +++T+ RLF
Sbjct: 136 ELILDEIQAAPVLSLHVPMPRHARLAVLCEELVRDPSLPATLDDWALRLHMNTRTLARLF 195

Query: 193 KAETGMSYQEWKQQWRLLKAIELLSKETPVNQVSDWLGFSSDSAFIAFFKKQTGQTPLSF 252
           + ETGM++  W +Q RLL ++  L+    + +V+   G+ S SAF A F++  G  P  +
Sbjct: 196 QRETGMNFGAWCRQARLLLSLPQLAAGASILEVALAHGYESPSAFTAMFRRTLGVPPSQY 255

Query: 253 I 253
           +
Sbjct: 256 L 256