Pairwise Alignments

Query, 257 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 265 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score = 94.4 bits (233), Expect = 2e-24
 Identities = 64/228 (28%), Positives = 110/228 (48%), Gaps = 3/228 (1%)

Query: 25  DIG-NHDSGLHQHQKGQLLFAPQGCIRFALDDSICILPPTKAVWIPSGTRHRAIMTNVVA 83
           DIG +  +  H H  G L +A  G ++   +    + PP  AVWIP    H   + + + 
Sbjct: 26  DIGADTHAASHSHTWGHLNYAAHGTMQMDTEGLRFLSPPQYAVWIPPKVVHSCTLRHAIV 85

Query: 84  YRSIYFDCHAF-KCPDHITMIEVNALLKALIDKMALWSWDTPQ-ESMNNTTTLFWEEFYA 141
           YRSIY       + P     + ++ ++K+++   A      P+ E+      +  ++   
Sbjct: 86  YRSIYIAPGLCGRLPAEPCTVRISPIIKSVLADFAARDLHVPRTEADLRLAHVVVDQLAL 145

Query: 142 AQRQTFHLPLPTNRRFKVFRKQLMQATFFAPDLVSLANSVGASSKTVTRLFKAETGMSYQ 201
           A+ Q  +LP   +       + L  A      L   A+SV  + +T+ R  + E GMS+ 
Sbjct: 146 AEVQRCYLPAAASPALVGVLEALQAAPGDHRPLAQWADSVHMTERTLARQCQRELGMSFG 205

Query: 202 EWKQQWRLLKAIELLSKETPVNQVSDWLGFSSDSAFIAFFKKQTGQTP 249
           EW+Q+ R L+AI+ L     V +++  LG+S+ SAFIA F+++ G TP
Sbjct: 206 EWRQRLRFLRAIDALEAGRTVQEIAFDLGYSTASAFIAMFQREAGTTP 253