Pairwise Alignments

Query, 257 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 277 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score =  114 bits (286), Expect = 2e-30
 Identities = 63/226 (27%), Positives = 115/226 (50%), Gaps = 2/226 (0%)

Query: 26  IGNHDSGLHQHQKGQLLFAPQGCIRFALDDSICILPPTKAVWIPSGTRHRAIMTNVVA-Y 84
           +G  +   H+H +GQ+     G +         +LPP +A W+P G  H+  ++   + +
Sbjct: 42  LGTREYDWHRHLRGQVFCVESGLVHVRTAHGSWLLPPHRAGWLPPGELHKVGISGATSGW 101

Query: 85  RSIYFDCHAFKCPDHITMIEVNALLKALIDKMALWSW-DTPQESMNNTTTLFWEEFYAAQ 143
             +     A + P+   +I ++ L++AL+ +   W   DT          +  +E   A 
Sbjct: 102 TVLIAPAAAAQLPERPCVIGISELMRALVRRAVTWGGHDTLDAEQERMAAVLLDEMRRAP 161

Query: 144 RQTFHLPLPTNRRFKVFRKQLMQATFFAPDLVSLANSVGASSKTVTRLFKAETGMSYQEW 203
            +  HLP+PT+RR       + +       L   A+  G S +T++RLF AET +S+ +W
Sbjct: 162 HEPLHLPMPTDRRLLRIATAIYEQPENNRTLDEWAHWAGLSPRTLSRLFLAETAVSFAKW 221

Query: 204 KQQWRLLKAIELLSKETPVNQVSDWLGFSSDSAFIAFFKKQTGQTP 249
           +QQ RL+ A+E L++   V  ++D LG+++ S FIA F++  G++P
Sbjct: 222 RQQARLVHALERLARGEAVADIADALGYATPSNFIAMFRRAFGESP 267