Pairwise Alignments

Query, 257 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 290 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score =  122 bits (306), Expect = 8e-33
 Identities = 74/229 (32%), Positives = 124/229 (54%), Gaps = 12/229 (5%)

Query: 33  LHQHQKGQLLFAPQGCIRFALDDSICILPPTKAVWIPSGTRHRAIMTNVVAYRSIYFDCH 92
           LH+H   QL F+ +G IR +  D   I+PP++A+W+P+   H   +      R++Y   H
Sbjct: 56  LHEHPWPQLTFSTRGVIRLSTQDGSYIVPPSRALWVPANMPHSITLIEDAELRTVYL--H 113

Query: 93  AFKCP--DHITMIEVNALLKALI-------DKMALWSWDTPQESMNNTTTLFWEEFYAAQ 143
           A+  P  +   ++E++ LL+AL+       D +       PQ        L  +E   A 
Sbjct: 114 AWIAPTWEKCEVLEISPLLRALMLALDTTPDGLPPADPHAPQRE-RMIAPLLVDEVERAT 172

Query: 144 RQTFHLPLPTNRRFKVFRKQLMQATFFAPDLVSLANSVGASSKTVTRLFKAETGMSYQEW 203
           +    +PLP ++R +   + L++       L   A ++GAS +TV RLF+ + GMS+Q+W
Sbjct: 173 QIRIDVPLPADKRLRQLCEVLLRNPADRATLAERAATIGASERTVARLFRDQLGMSWQQW 232

Query: 204 KQQWRLLKAIELLSKETPVNQVSDWLGFSSDSAFIAFFKKQTGQTPLSF 252
           +QQ  +  A+ LL++   V+QV+   G+++DSAF A FK  TG++P SF
Sbjct: 233 RQQAVMAHALPLLARGMAVSQVAAASGYATDSAFCAMFKAATGRSPTSF 281