Pairwise Alignments

Query, 257 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 273 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score =  106 bits (264), Expect = 6e-28
 Identities = 66/243 (27%), Positives = 113/243 (46%), Gaps = 1/243 (0%)

Query: 15  LPACVVGIAADIGNHDSGLHQHQKGQLLFAPQGCIRFALDDSICILPPTKAVWIPSGTRH 74
           +P   + +  +    +  +HQH  GQL+ A +G +   +  ++ ++PP   VWIP GT H
Sbjct: 17  VPVMALRVDVEARAREIPIHQHPMGQLVIALRGAVSCEVPGTLWMVPPQAGVWIPGGTPH 76

Query: 75  RAIMTNVVAYRSIYFDCHAFKCPDHITMIEVNALLKALIDKMA-LWSWDTPQESMNNTTT 133
               T       ++    A   P     + ++ +L  +I  +A L     P  + +    
Sbjct: 77  SNHGTANALIFYLFVAPGAATLPTKCCTLAISPMLSEMIQHLAGLAPTYEPGSATDRLAH 136

Query: 134 LFWEEFYAAQRQTFHLPLPTNRRFKVFRKQLMQATFFAPDLVSLANSVGASSKTVTRLFK 193
           +  ++  A   + F LP+P + R +     +         L   A   GAS +T+ RL  
Sbjct: 137 VLLDQLAAMPNEDFSLPMPQDARLRKISHAITLDPSDRRTLQDWAAETGASERTLNRLCT 196

Query: 194 AETGMSYQEWKQQWRLLKAIELLSKETPVNQVSDWLGFSSDSAFIAFFKKQTGQTPLSFI 253
           A+TG+S+  W++Q  ++ A+  LS    V QV+  LG+ S SAFI  FKK  G+ P ++I
Sbjct: 197 AQTGLSFGRWRRQLHMIVALRELSGGATVQQVAYGLGYESPSAFITMFKKAFGKPPAAYI 256

Query: 254 KIR 256
             R
Sbjct: 257 AER 259