Pairwise Alignments

Query, 257 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 280 a.a., helix-turn-helix transcriptional regulator from Variovorax sp. OAS795

 Score =  124 bits (312), Expect = 2e-33
 Identities = 77/233 (33%), Positives = 128/233 (54%), Gaps = 20/233 (8%)

Query: 33  LHQHQKGQLLFAPQGCIRFALDDSICILPPTKAVWIPSGTRHRAIMTNVVAYRSIYFDCH 92
           LHQH   QL F+ +G IR +  D   I+PP++AVW+P+   H  ++      R++Y   H
Sbjct: 45  LHQHPWPQLTFSTRGVIRLSTQDGSYIVPPSRAVWVPANMPHSIMLIEDAELRTVYL--H 102

Query: 93  AFKCP--DHITMIEVNALLKALIDKMALWSWDTPQESM-----------NNTTTLFWEEF 139
           A+  P  +   ++E++ LL+AL+  +AL   DT  + +                L  +E 
Sbjct: 103 AWLGPPWEKCEVLEISPLLRALM--LAL---DTTPDGLPPADPHAAQRERMIAPLLVDEL 157

Query: 140 YAAQRQTFHLPLPTNRRFKVFRKQLMQATFFAPDLVSLANSVGASSKTVTRLFKAETGMS 199
             A +    +PLP ++R +   + L++       L   A ++GAS +TV RLF+ + GMS
Sbjct: 158 ERATQIRIDVPLPADKRLRQLCEALLRNPADRATLAERAAAIGASERTVARLFRDQLGMS 217

Query: 200 YQEWKQQWRLLKAIELLSKETPVNQVSDWLGFSSDSAFIAFFKKQTGQTPLSF 252
           +Q+W+QQ  +  A+ LL++   V+QV+   G+++DSAF A FK  TG++P SF
Sbjct: 218 WQQWRQQAVMAHALPLLARGMAVSQVAAASGYATDSAFCAMFKAATGRSPTSF 270