Pairwise Alignments

Query, 257 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 262 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  100 bits (248), Expect = 4e-26
 Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 6/228 (2%)

Query: 26  IGNHDSGLHQHQKGQLLFAPQGCIRFALDDSICILPPTKAVWIPSGTRHRAIMTNVVAYR 85
           + +  S +HQH  GQL +   G ++  +     + PP  AVW+P  T H       + YR
Sbjct: 26  VADTHSAVHQHAWGQLNYTAHGVMQLDVAGQRFLSPPHYAVWVPPDTEHGCYNPQAIVYR 85

Query: 86  SIYFD---CHAFKCPDHITMIEVNALLKALIDKMALWSWDTPQESMNNTTT-LFWEEFYA 141
           SIY D   C A   P H   + ++ +LKA++   A  +    ++  +     +  ++   
Sbjct: 86  SIYLDRSLCAAL--PPHPCSLMISDILKAILGDFARRNLKVAEDERDQRLVQVLLDQLLL 143

Query: 142 AQRQTFHLPLPTNRRFKVFRKQLMQATFFAPDLVSLANSVGASSKTVTRLFKAETGMSYQ 201
           A     +LP   +   +     L         L   A  V  S +T+ R F  E G+S+ 
Sbjct: 144 APTLACYLPFAHSDGLRQVLDALSAEPGDNRPLADWAARVHVSERTLARQFLRELGISFG 203

Query: 202 EWKQQWRLLKAIELLSKETPVNQVSDWLGFSSDSAFIAFFKKQTGQTP 249
           EW+ + R L+AIE L    P+  ++  LG+SS SAFIA F++Q   TP
Sbjct: 204 EWRLRLRFLRAIEALEAGLPIQAIAFDLGYSSASAFIAMFQRQARCTP 251