Pairwise Alignments

Query, 257 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 257 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score = 98.2 bits (243), Expect = 1e-25
 Identities = 63/223 (28%), Positives = 105/223 (47%), Gaps = 2/223 (0%)

Query: 34  HQHQKGQLLFAPQGCIRFALDDSICILPPTKAVWIPSGTRHRAIMTNVVAYRSIYFDCHA 93
           H H K QL++A +G +     +    +PP++ VW+P G  H       V  RS++    A
Sbjct: 35  HSHTKHQLIYAIKGLMIVESGNECWTVPPSRGVWMPCGQVHAIRCVGDVKMRSVFVRSDA 94

Query: 94  FK-CPDHITMIEVNALLKALIDKMALWSWDTPQESMN-NTTTLFWEEFYAAQRQTFHLPL 151
               P     I ++ LL  LI     ++    ++S       L  +E          L  
Sbjct: 95  ATGLPLQSKAISISPLLSELIKASVGFTAPFAEDSREARVMRLILDEICVLPTLPLKLSQ 154

Query: 152 PTNRRFKVFRKQLMQATFFAPDLVSLANSVGASSKTVTRLFKAETGMSYQEWKQQWRLLK 211
           P+++R +V    L +       +      +G   KT+ RLF+ ETGM++ +W+QQ RL++
Sbjct: 155 PSDQRLRVICTALHERPEDNATVADWGLRLGVDEKTIQRLFRKETGMTFGQWRQQARLMQ 214

Query: 212 AIELLSKETPVNQVSDWLGFSSDSAFIAFFKKQTGQTPLSFIK 254
           A+E ++    +  V+  LG+ S SAF + FK+Q G TP  F +
Sbjct: 215 ALERIALGERIIDVAGALGYDSPSAFASMFKRQFGTTPSQFFR 257