Pairwise Alignments

Query, 257 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 257 a.a., HTH-type transcriptional regulator NimR from Pseudomonas lactucae CFBP13502

 Score =  100 bits (250), Expect = 2e-26
 Identities = 66/223 (29%), Positives = 103/223 (46%), Gaps = 2/223 (0%)

Query: 34  HQHQKGQLLFAPQGCIRFALDDSICILPPTKAVWIPSGTRHRAIMTNVVAYRSIYFDCHA 93
           H H+K QLL+A +G +      S   +PP +  W+P G  H       +  RS++    +
Sbjct: 35  HSHEKHQLLYATEGVMVVHSAQSQWTVPPNRGFWMPCGHVHSLRCVGPLKMRSVFVRADS 94

Query: 94  F-KCPDHITMIEVNALLKALIDKMALWSWDTPQESMN-NTTTLFWEEFYAAQRQTFHLPL 151
           F   P     + ++ LL  LI           ++S +     L  +E          LP 
Sbjct: 95  FPNLPTETKAVSISPLLSELIKASVSLKPPYAEDSRDARIMHLILDELALLPALPLSLPQ 154

Query: 152 PTNRRFKVFRKQLMQATFFAPDLVSLANSVGASSKTVTRLFKAETGMSYQEWKQQWRLLK 211
           P + R +     L Q    A  +   +  +    KT+ RLF+ ETGM++ +W+QQ RLL 
Sbjct: 155 PADPRIQHICLALQQDPGDASTVAHWSERLDLDQKTIQRLFRKETGMTFGQWRQQARLLL 214

Query: 212 AIELLSKETPVNQVSDWLGFSSDSAFIAFFKKQTGQTPLSFIK 254
           A+E ++    +  V+  LG+ S SAF + FKKQ G+TP  F K
Sbjct: 215 ALERIAVGEKIIDVALALGYDSPSAFTSMFKKQFGKTPSHFFK 257