Pairwise Alignments

Query, 257 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 273 a.a., Transcriptional regulator, AraC family from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  101 bits (251), Expect = 2e-26
 Identities = 68/225 (30%), Positives = 108/225 (48%), Gaps = 10/225 (4%)

Query: 34  HQHQKGQLLFAPQGCIRFALDDSICILPPTKAVWIPSGTRHRAIMTNVVAYRSIYFDCHA 93
           H H K QL++A +G +    +    ++PPT+A+W+  G  H       V  RS+    +A
Sbjct: 49  HAHAKHQLIYAVRGVMVVQAEAGQWVVPPTRAIWMQRGMTHEIRCVGEVHMRSLMVAPNA 108

Query: 94  F-KCPDHITMIEVNALLKALIDKMALWSWDTPQESMNNTTT-----LFWEEFYAAQRQTF 147
             +  D    + ++ LL+ LI      + + PQ  ++ T       L  +E  A      
Sbjct: 109 APRLMDRTQAVAISPLLRELIRA----AMEVPQPYVSGTRDGRLMRLILDELRALPVLPL 164

Query: 148 HLPLPTNRRFKVFRKQLMQATFFAPDLVSLANSVGASSKTVTRLFKAETGMSYQEWKQQW 207
           +L +PT+ R       L +       +   A  +    KT+ RLF  +TGM++ +W+QQ 
Sbjct: 165 YLQMPTDPRLLQIAAVLQRRLDDPSTMADWARRLAIDVKTIQRLFIKDTGMTFAQWRQQA 224

Query: 208 RLLKAIELLSKETPVNQVSDWLGFSSDSAFIAFFKKQTGQTPLSF 252
           RLL+A+E L+    V  V+  LG+ S SAF A F+K  GQTP  F
Sbjct: 225 RLLRALERLATGEKVIDVALALGYESPSAFAAMFRKHFGQTPSQF 269