Pairwise Alignments

Query, 257 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 253 a.a., Transcriptional regulator, AraC family from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  115 bits (289), Expect = 7e-31
 Identities = 75/227 (33%), Positives = 114/227 (50%), Gaps = 13/227 (5%)

Query: 34  HQHQKGQLLFAPQGCIRF-------ALDDSICILPPTKAVWIPSGTRHRAIMTNVVAYRS 86
           H+H  GQL +   G ++        +L     I+PP++AVWIP G RH   +      R+
Sbjct: 17  HRHPWGQLAYCTTGIVQAMASPDDPSLQAVTYIVPPSRAVWIPPGMRHAVTVREAAELRT 76

Query: 87  IYFDCHAFKCPDHIT---MIEVNALLKALIDKMALWSWDTPQESMNNTTT-LFWEEFYAA 142
           +Y   HA   P   T   MI V+ LL+ LI  M   +    + + +   T L  +E   A
Sbjct: 77  LYI--HAGAAPPGWTACRMIVVSPLLRELIQAMDAATRRAAEPARDRLLTDLVLDELAHA 134

Query: 143 QRQTFHLPLPTNRRFKVFRKQLMQATFFAPDLVSLANSVGASSKTVTRLFKAETGMSYQE 202
             Q   +PLP ++R +   + +++A      L   A   GAS +TV RLF+ E G +YQ+
Sbjct: 135 DTQPLGVPLPRDKRLRALCEAVLRAPGERATLAEWAADTGASERTVARLFREELGTTYQQ 194

Query: 203 WKQQWRLLKAIELLSKETPVNQVSDWLGFSSDSAFIAFFKKQTGQTP 249
           W+QQ  L  A+ +L++   + QV+   G++SDSAF A FK   G  P
Sbjct: 195 WRQQAVLAHALPMLARGMSIGQVAAATGYASDSAFSAMFKAAMGHPP 241