Pairwise Alignments

Query, 257 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 284 a.a., helix-turn-helix transcriptional regulator from Serratia liquefaciens MT49

 Score =  109 bits (272), Expect = 7e-29
 Identities = 67/249 (26%), Positives = 125/249 (50%), Gaps = 6/249 (2%)

Query: 10  FDPDRLPACVVGIAADIGNHDSGL--HQHQKGQLLFAPQGCIRFALDDSICILPPTKAVW 67
           FD DR+P  V  +     N D  +  H+HQK QL++  +G IR  +++ + ++PP  A+W
Sbjct: 21  FDIDRVPRAVFAVQGSTVNKDWEVAHHRHQKAQLIYTMRGMIRCEVENGLWLVPPQCALW 80

Query: 68  IPSGTRHRAIMTNVVAYRSIYFDCHAFK-CPDHITMIEVNALLKALIDKMALWS--WDTP 124
           +PS   H A  T      +++ D  A    P     + V+ LL+ L+ + + +   +D  
Sbjct: 81  MPSNVLHNAQGTGATECYALFVDQAAIAGLPTSCCTLAVSPLLRELLLQASGFDPLYDE- 139

Query: 125 QESMNNTTTLFWEEFYAAQRQTFHLPLPTNRRFKVFRKQLMQATFFAPDLVSLANSVGAS 184
           Q +      +  ++  AA  +  HLP+  + R +   ++L+        L   A  +G S
Sbjct: 140 QGAEGRLIGVLLDQLAAAPIENLHLPVSNDARIRQLTERLLADPADKATLSQWAQRIGMS 199

Query: 185 SKTVTRLFKAETGMSYQEWKQQWRLLKAIELLSKETPVNQVSDWLGFSSDSAFIAFFKKQ 244
            +T+ R  + + GMS+  W++Q  ++ A++ L+K   V +V+  LG+ S S F+  F+K 
Sbjct: 200 ERTLNRTLQQQMGMSFGHWRRQLHVMLALQRLTKGETVQRVALDLGYESASGFVTMFRKA 259

Query: 245 TGQTPLSFI 253
            G+ P  ++
Sbjct: 260 VGKPPARYL 268