Pairwise Alignments

Query, 257 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 264 a.a., Transcriptional regulator, AraC family from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 97.8 bits (242), Expect = 2e-25
 Identities = 60/223 (26%), Positives = 110/223 (49%), Gaps = 5/223 (2%)

Query: 34  HQHQKGQLLFAPQGCIRFALDDSICILPPTKAVWIPSGTRHRAIMTNVVAYRSIYFDCHA 93
           HQH+KGQL+ A  G I   +++++ ++PP  AVW+P    H   +T       ++ +  A
Sbjct: 35  HQHRKGQLILALHGAITCEVENAMWMVPPQYAVWLPGSLPHSNHVTAGAELCFLFIEPAA 94

Query: 94  FKCPDHITMIEVNALLKALIDKMALWSWDTPQESMNNTTTLF---WEEFYAAQRQTFHLP 150
              P+    ++++ L + LI  ++L     P+ +   T  L    ++E     ++   LP
Sbjct: 95  VVMPERCCTLKISPLCRELI--LSLARRTDPERAQMPTQRLIQVLFDELPQQPQEQLQLP 152

Query: 151 LPTNRRFKVFRKQLMQATFFAPDLVSLANSVGASSKTVTRLFKAETGMSYQEWKQQWRLL 210
           +  + + +   + + Q       L   A+    S + + RL   ETG+S++ W+ Q +L+
Sbjct: 153 VSGHPKIRQMVETMAQEPARWNTLGQWASVFAMSERNLARLVVKETGLSFRRWRHQLQLI 212

Query: 211 KAIELLSKETPVNQVSDWLGFSSDSAFIAFFKKQTGQTPLSFI 253
            A++ L     V Q +  LG+ S +AFI  FKK  GQTP  ++
Sbjct: 213 LALQALIAGRNVQQTAQMLGYDSTTAFITMFKKGLGQTPGQYL 255