Pairwise Alignments

Query, 257 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 254 a.a., AraC-type DNA-binding domain-containing proteins from Enterobacter asburiae PDN3

 Score =  104 bits (260), Expect = 2e-27
 Identities = 69/227 (30%), Positives = 112/227 (49%), Gaps = 10/227 (4%)

Query: 34  HQHQKGQLLFAPQGCIRFALDDSICILPPTKAVWIPSGTRHRAIMTNVVAYRSIYFDCHA 93
           H+H   QLL    G +R        ++PP + VW+P+GTRH   +T  VA R+++ D  A
Sbjct: 30  HEHDCAQLLHTLSGVVRVDTASGCWVVPPGRGVWLPAGTRHSLRITGNVAARTLFIDPLA 89

Query: 94  -FKCPDHITMIEVNALLKALIDKMALWSWDTPQESMNNTTT-----LFWEEFYAAQRQTF 147
               P    ++++  LL+ LI    L S D P+     +       L  +E        F
Sbjct: 90  RADLPATCQIVQIAPLLRELI----LVSLDLPESYSPGSRDERVYELILDEIRTMPVLPF 145

Query: 148 HLPLPTNRRFKVFRKQLMQATFFAPDLVSLANSVGASSKTVTRLFKAETGMSYQEWKQQW 207
           HLP P     +    Q+ Q    +      A+ +  S +T+ R F+ +TG+S+ EW ++ 
Sbjct: 146 HLPEPETEALRHLCLQIRQNAGESWSSAQAASMMNMSERTLNRHFQQQTGLSFGEWLRRA 205

Query: 208 RLLKAIELLSKETPVNQVSDWLGFSSDSAFIAFFKKQTGQTPLSFIK 254
           RLL+A+  L++  PV +V+  LG+ S SAF A F++  G +P  + K
Sbjct: 206 RLLEALVRLAQGQPVLRVALELGYGSHSAFTAMFRRVMGVSPSDYFK 252