Pairwise Alignments

Query, 257 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 263 a.a., AraC-type DNA-binding domain-containing proteins from Enterobacter asburiae PDN3

 Score =  103 bits (256), Expect = 5e-27
 Identities = 66/249 (26%), Positives = 124/249 (49%), Gaps = 7/249 (2%)

Query: 10  FDPDRLPACVVGIAADIGNHDSGL--HQHQKGQLLFAPQGCIRFALDDSICILPPTKAVW 67
           +DPD      V     +   +  +  H H+KGQL+ A  G I   +++++ ++PP  AVW
Sbjct: 9   YDPDSQHDAAVAFRIRVVAEEQYIPRHHHRKGQLILALGGAITCEVENAMLMVPPQYAVW 68

Query: 68  IPSGTRHRAIMTNVVAYRSIYFDCHAFKCPDHITMIEVNALLKALIDKMALWSWDTPQES 127
           IP    H    T       ++ +  A   PD    ++++ L++ LI  +A  S +  Q S
Sbjct: 69  IPGQMPHSNRATPGAQLCFLFIEPGAASLPDRCCTLKISPLVRELILSLAEKSRE--QLS 126

Query: 128 MNNTTTL---FWEEFYAAQRQTFHLPLPTNRRFKVFRKQLMQATFFAPDLVSLANSVGAS 184
           +  T+ L    ++E    +++   LP+  + + ++  +++ +       L   A+    S
Sbjct: 127 LTPTSRLVHVLFDELPLQRQEHLQLPVSPHPKIRLMSEKMAEEPAAWQTLTQWASHFAMS 186

Query: 185 SKTVTRLFKAETGMSYQEWKQQWRLLKAIELLSKETPVNQVSDWLGFSSDSAFIAFFKKQ 244
            +++ RL   ETG+S++ W+ Q +L+ A++ L     V QV+  LG+ S +AFI  F+K 
Sbjct: 187 ERSLARLVVKETGLSFRRWRHQLQLIVALQHLIGGKSVQQVAQSLGYDSTTAFITMFRKG 246

Query: 245 TGQTPLSFI 253
            GQTP  ++
Sbjct: 247 LGQTPARYM 255