Pairwise Alignments

Query, 257 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 265 a.a., AraC-type DNA-binding domain-containing proteins from Enterobacter asburiae PDN3

 Score =  116 bits (291), Expect = 4e-31
 Identities = 69/226 (30%), Positives = 112/226 (49%), Gaps = 8/226 (3%)

Query: 34  HQHQKGQLLFAPQGCIRFALDDSICILPPTKAVWIPSGTRHRAIMTNVVAYRSIYFD--- 90
           H+H +GQLLFA +G +         ++PP +A+WIP    H   + +    R+++F    
Sbjct: 33  HRHPQGQLLFAIKGVMLVETGSKRWVIPPQRALWIPPFQEHTYSVLSATELRAVWFSPAL 92

Query: 91  ---CHAFKCPDHITMIEVNALLKALIDKMALWSWDTPQESMNNTTTLFWEEFYAAQRQTF 147
              C +FK  + + +I   AL K LI    L+S      S  +   L  E    AQ+ + 
Sbjct: 93  ISQCGSFKRKEEVHVITATALFKELI--AGLFSAQYRPASQRSMAVLLLEILSEAQQISA 150

Query: 148 HLPLPTNRRFKVFRKQLMQATFFAPDLVSLANSVGASSKTVTRLFKAETGMSYQEWKQQW 207
            LP+P + R       ++    +   +  LA  V  S +T +R F  +TG S++ W+Q+ 
Sbjct: 151 ELPMPVDERLHRVACDIIANNLWDVSMERLAEQVAMSERTFSRAFIKDTGFSFRAWRQRA 210

Query: 208 RLLKAIELLSKETPVNQVSDWLGFSSDSAFIAFFKKQTGQTPLSFI 253
           R+  +++LL+   PV QV+  LGFS  +AF A F+   G TP  F+
Sbjct: 211 RICASLDLLANGYPVKQVAWMLGFSGQAAFAAAFRAVVGATPADFL 256