Pairwise Alignments

Query, 257 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 265 a.a., helix-turn-helix transcriptional regulator from Dickeya dadantii 3937

 Score = 80.9 bits (198), Expect = 3e-20
 Identities = 58/231 (25%), Positives = 104/231 (45%), Gaps = 21/231 (9%)

Query: 34  HQHQKGQLLFAPQGCIRFALDDSICILPPTKAVWIPSGTRHRAIMTNVVAYRSIYFDCHA 93
           HQH   + L+A +G +R  ++    I+P    VWIP+   HR + T+ V   S+Y +   
Sbjct: 44  HQHPFVEFLYAREGGMRVEIEGKTLIVPVLYGVWIPAHVPHRILATSDVLLESLYIE--- 100

Query: 94  FKCPDHITM-------IEVNALLKALIDKMAL-----WSWDTPQESMNNTTTLFWEEFYA 141
              PD++ +       + V+  ++  I          +  D     +    T    +   
Sbjct: 101 ---PDYVAIDHSACKVVLVSDFIREFIHYATRHVPEQYDHDGDDARLVRVLTTLLRQLPD 157

Query: 142 AQRQTFHLPLPTNRRFKVFRKQLMQATFFAPDLVSLANSVGASSKTVTRLFKAETGMSYQ 201
           A    F L  P +       + + Q    A  +   A+  G S +T +R FK ETG+++ 
Sbjct: 158 AG---FSLSWPHSATLMRVCRDIQQTPDVAHGIEEWASRTGMSVRTFSRRFKKETGVAFS 214

Query: 202 EWKQQWRLLKAIELLSKETPVNQVSDWLGFSSDSAFIAFFKKQTGQTPLSF 252
           EWK++ RLL+++ +L     V QV+  LG++S ++F   F++  G  P  +
Sbjct: 215 EWKKRLRLLESVVMLKNNHSVTQVALELGYASTASFTFAFRQMFGVPPTRY 265