Pairwise Alignments

Query, 257 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 273 a.a., HTH-type transcriptional regulator NimR from Azospirillum sp. SherDot2

 Score =  115 bits (288), Expect = 9e-31
 Identities = 71/251 (28%), Positives = 117/251 (46%), Gaps = 3/251 (1%)

Query: 10  FDPDRLPACVVGIAADIGNHDSGL--HQHQKGQLLFAPQGCIRFALDDSICILPPTKAVW 67
           FDPD      V    D  ++++ +  H H++GQL+ A  G +    DD I I+PP   VW
Sbjct: 15  FDPDLADRPAVARLLDFADYEAEVPVHVHRRGQLILALHGAVTCTADDEIWIVPPDCGVW 74

Query: 68  IPSGTRHRAIMTNVVAYRSIYFDCHAFKCPDHITMIEVNALLKALIDKMALWSWDTPQES 127
           IP G  H    T       ++ +  A   P+    + ++ L++ L++++     D P +S
Sbjct: 75  IPGGMPHSVRTTANARLSYLFVEPGAANLPEVCCTLSISPLVRELVNRLTGEVLDYPPDS 134

Query: 128 -MNNTTTLFWEEFYAAQRQTFHLPLPTNRRFKVFRKQLMQATFFAPDLVSLANSVGASSK 186
                  +  +E     R+ F+LP+  + + +     L         L   A  V  S +
Sbjct: 135 HAARLARVTLDELAGMPREHFNLPISNDPKIRAIADALTLEPSDRSTLGDWARRVAMSER 194

Query: 187 TVTRLFKAETGMSYQEWKQQWRLLKAIELLSKETPVNQVSDWLGFSSDSAFIAFFKKQTG 246
           ++ RL   ETG+++  W+QQ  L+ A+  L+    V  V+D LG+ S +AFI  FKK  G
Sbjct: 195 SLARLMLRETGLTFGRWRQQLHLVVALRELAGGAAVQTVADTLGYESVNAFITMFKKALG 254

Query: 247 QTPLSFIKIRR 257
            TP  +   RR
Sbjct: 255 STPAQYFTQRR 265