Pairwise Alignments

Query, 257 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 258 a.a., HTH-type transcriptional regulator NimR from Azospirillum sp. SherDot2

 Score = 94.4 bits (233), Expect = 2e-24
 Identities = 59/224 (26%), Positives = 104/224 (46%), Gaps = 2/224 (0%)

Query: 33  LHQHQKGQLLFAPQGCIRFALDDSICILPPTKAVWIPSGTRHRAIMTNVVAYRSIYFDCH 92
           LH H++GQL+    G +  +      ++PP   +WIP G  H   M   V   S++ D  
Sbjct: 32  LHWHRRGQLISGITGVLIMSTPQGRWVVPPDFGLWIPPGIMHEVRMLGAVTTHSLFLDPD 91

Query: 93  AFK-CPDHITMIEVNALLKALIDKMALWSWDTPQESMNNTT-TLFWEEFYAAQRQTFHLP 150
                PD   ++ ++  +++LI +      D   +S +     L   E      Q   +P
Sbjct: 92  LTGGMPDRCQVVGLSPFIRSLIARAVDVPADYDPDSHDGAVMALIRYEMLHLPAQPLTVP 151

Query: 151 LPTNRRFKVFRKQLMQATFFAPDLVSLANSVGASSKTVTRLFKAETGMSYQEWKQQWRLL 210
            PT++      ++ ++       +    + +G S +  TRLF+ ETG+S+ EW+QQ  L 
Sbjct: 152 FPTSQALAERCRRFLRQPVVHETIEQWCDELGVSRRAFTRLFRRETGLSFLEWRQQACLA 211

Query: 211 KAIELLSKETPVNQVSDWLGFSSDSAFIAFFKKQTGQTPLSFIK 254
            A+  L     V  V+  LG+ + +AF A FK+  G +P +++K
Sbjct: 212 AALPRLVAGEAVTAVAIDLGYDNPAAFTAMFKRVLGSSPRAYLK 255