Pairwise Alignments

Query, 257 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 284 a.a., AraC family transcriptional regulator from Agrobacterium fabrum C58

 Score = 80.1 bits (196), Expect = 5e-20
 Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 2/230 (0%)

Query: 29  HDSGLHQHQKGQLLFAPQGCIRFALDDSICILPPTKAVWIPSGTRHRAIMTNVVAYRSIY 88
           H +  H H + Q+  A QG +  +  D   ++PP   + IP+G +H A + + V   SIY
Sbjct: 42  HRTPPHSHSRVQIWCARQGVVLVSTADGRWMIPPGHGLLIPAGLQHEAEIISNVEMHSIY 101

Query: 89  FDCHAFKCPDHITMIEVNALLKALIDKM-ALWSWDTPQESMNNTTTLFWEEFYAAQRQTF 147
                F+  +   ++E+  L  +LI ++ A     +          L  +E      +  
Sbjct: 102 VHPELFQA-ESPKVVEITDLASSLISELLAEEHQPSAFHRQGLVRALLLDEVNRLPERPL 160

Query: 148 HLPLPTNRRFKVFRKQLMQATFFAPDLVSLANSVGASSKTVTRLFKAETGMSYQEWKQQW 207
            LP P N+R     +  ++      ++   A ++  S ++ TRLF+ E G+S+  W+QQ 
Sbjct: 161 GLPFPDNQRLAALCRDFLRKPVARVEIDEWAAAMSISRRSFTRLFRRELGVSFVTWRQQA 220

Query: 208 RLLKAIELLSKETPVNQVSDWLGFSSDSAFIAFFKKQTGQTPLSFIKIRR 257
            +  ++  L+    V  V+   G+ +  AF   F++  G +P ++ +  R
Sbjct: 221 CIFASLPRLAAGEAVTNVALDAGYENIPAFTTMFRRMLGSSPRAYRQAAR 270