Pairwise Alignments

Query, 257 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 251 a.a., HTH-type transcriptional regulator NimR from Acinetobacter radioresistens SK82

 Score = 80.1 bits (196), Expect = 4e-20
 Identities = 52/220 (23%), Positives = 94/220 (42%), Gaps = 3/220 (1%)

Query: 34  HQHQKGQLLFAPQGCIRFALDDSICILPPTKAVWIPSGTRHRAIMTNVVAYRSIYFDCHA 93
           H    G   F+  G +         + PP  A+W+P  T H +I  +      I    H 
Sbjct: 28  HSSLWGDFNFSLDGILEIQTGKQTFLAPPNYALWLPPQTEHCSIALDHSVTHFICIRVHP 87

Query: 94  FKC---PDHITMIEVNALLKALIDKMALWSWDTPQESMNNTTTLFWEEFYAAQRQTFHLP 150
             C   P  +  + +   L AL+ ++   S   P    ++   + +++   A+    +LP
Sbjct: 88  SLCDQLPREVKTLSIRPFLLALVREILEQSSGAPGPVYSHLIQVLFDQLLQAKIYDDYLP 147

Query: 151 LPTNRRFKVFRKQLMQATFFAPDLVSLANSVGASSKTVTRLFKAETGMSYQEWKQQWRLL 210
              +       +QL     F   L +L      S + + RL + E G+S  EW+ + +++
Sbjct: 148 QSHHTVLLPVLQQLADPKLFQYSLQTLLKRFSLSERQILRLSQQELGLSISEWRNRAKII 207

Query: 211 KAIELLSKETPVNQVSDWLGFSSDSAFIAFFKKQTGQTPL 250
            AI  + +   + +++  LG+   S+FIAFFK+ T  TPL
Sbjct: 208 YAISQIRQGASIKRLAYELGYQHSSSFIAFFKRYTQHTPL 247