Pairwise Alignments

Query, 484 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 499 a.a., integral membrane sensor signal transduction histidine kinase from Variovorax sp. SCN45

 Score = 51.2 bits (121), Expect = 8e-11
 Identities = 57/217 (26%), Positives = 92/217 (42%), Gaps = 24/217 (11%)

Query: 272 LRYQEGRERRFILQLLTHELRTPITSLGFTVESLRSQFDELSP--KAQESLWRLMADHQR 329
           LR    RE+ FI     HELRTPI ++   VE+L+S   +  P  +  E   R++  + R
Sbjct: 250 LRASIAREQSFIADA-AHELRTPIAAMRVNVEALQSLLTQHIPTERQHELFARVLNSNAR 308

Query: 330 LAQLSETSRHYLSPSHDTMARHPAQLSDFIEHCIEGF-------EVELHLKHDS--ILAL 380
             +L       +  +    A  P +L D ++  +          EVE+ L  D    +A 
Sbjct: 309 AERLVGQLLRLMRSNAQASAPGPLRLDDLLQERLAALSALAHVREVEIELVTDEPVEIAG 368

Query: 381 PYYWLGLCVTNLLSNAKQHGVPPIRLTVSVVAQ------TLRIEVEDCGEFPSFYQRLCK 434
               L   + NL+ NA ++   P+  TVSV  +       L +  +  G  P+  +R+  
Sbjct: 369 DRDSLVSMIDNLIDNATKYS--PVGSTVSVGIRRVGNEAVLTVADQGPGIMPALRERVFD 426

Query: 435 RLSRHQDTHSRPNTDNMGVGLQLVRKLITQMGGKLVI 471
           R  R  D          G+GL +VR +I   GG + +
Sbjct: 427 RFFRDPD----QTQTGSGLGLAIVRAVIDAHGGTIAL 459