Pairwise Alignments

Query, 484 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 475 a.a., integral membrane sensor signal transduction histidine kinase from Variovorax sp. SCN45

 Score = 49.3 bits (116), Expect = 3e-10
 Identities = 57/211 (27%), Positives = 90/211 (42%), Gaps = 26/211 (12%)

Query: 280 RRFILQLLTHELRTPITSLGFTVESLRSQFDELSPKAQESLWRLMAD----HQRLAQLSE 335
           +R +L  L+HELR+P+T      E L +     +P+ Q     L+ D       ++ L E
Sbjct: 260 KRGLLLALSHELRSPLTRARLNAELLPA-----TPEGQAEREALLRDLNEMRDLISDLLE 314

Query: 336 TSRHYLSPSHDTMARHPAQLSDFIEHCIEGFEVELHLKHDSILALPYY-----WLGLCVT 390
           + R  L+  H  + R P  L+  I   +        +  D    LP +      + L V 
Sbjct: 315 SER--LASPHVALQREPVDLAALIRETVAEMPGAQQVHLDLADGLPPHAVDRMRIRLLVR 372

Query: 391 NLLSNAKQH--GVP-----PIRLTVSVVAQTLRIEVEDCGEFPSFYQ--RLCKRLSRHQD 441
           NLL NA ++  G P      +R  +    Q + IEV D G      Q  RL +   R   
Sbjct: 373 NLLDNALRYSNGAPRPPCVSLRAALDGKRQGVEIEVRDHGPGVDEAQLDRLTEPFYRTDG 432

Query: 442 THSRPNTDNMGVGLQLVRKLITQMGGKLVIR 472
             +R  T  +G+G+ L R +    GG+L++R
Sbjct: 433 ARARA-TGGVGLGMYLCRLIAEAHGGELMVR 462